RS9_CAEEL
ID RS9_CAEEL Reviewed; 189 AA.
AC Q20228;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 03-AUG-2022, entry version 145.
DE RecName: Full=40S ribosomal protein S9;
GN Name=rps-9; ORFNames=F40F8.10;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS4 family.
CC {ECO:0000305}.
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DR EMBL; Z69302; CAA93262.1; -; Genomic_DNA.
DR PIR; T22034; T22034.
DR RefSeq; NP_496384.1; NM_063983.4.
DR AlphaFoldDB; Q20228; -.
DR SMR; Q20228; -.
DR BioGRID; 40009; 86.
DR DIP; DIP-25908N; -.
DR STRING; 6239.F40F8.10; -.
DR EPD; Q20228; -.
DR PaxDb; Q20228; -.
DR PeptideAtlas; Q20228; -.
DR EnsemblMetazoa; F40F8.10.1; F40F8.10.1; WBGene00004478.
DR GeneID; 174699; -.
DR KEGG; cel:CELE_F40F8.10; -.
DR UCSC; F40F8.10.1; c. elegans.
DR CTD; 174699; -.
DR WormBase; F40F8.10; CE05849; WBGene00004478; rps-9.
DR eggNOG; KOG3301; Eukaryota.
DR GeneTree; ENSGT00550000074829; -.
DR HOGENOM; CLU_089738_0_0_1; -.
DR InParanoid; Q20228; -.
DR OMA; ARQFITH; -.
DR OrthoDB; 1310788at2759; -.
DR PhylomeDB; Q20228; -.
DR Reactome; R-CEL-156827; L13a-mediated translational silencing of Ceruloplasmin expression.
DR Reactome; R-CEL-1799339; SRP-dependent cotranslational protein targeting to membrane.
DR Reactome; R-CEL-6791226; Major pathway of rRNA processing in the nucleolus and cytosol.
DR Reactome; R-CEL-72689; Formation of a pool of free 40S subunits.
DR Reactome; R-CEL-72695; Formation of the ternary complex, and subsequently, the 43S complex.
DR Reactome; R-CEL-72702; Ribosomal scanning and start codon recognition.
DR Reactome; R-CEL-72706; GTP hydrolysis and joining of the 60S ribosomal subunit.
DR Reactome; R-CEL-975956; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
DR Reactome; R-CEL-975957; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
DR PRO; PR:Q20228; -.
DR Proteomes; UP000001940; Chromosome II.
DR Bgee; WBGene00004478; Expressed in adult organism and 4 other tissues.
DR GO; GO:0022627; C:cytosolic small ribosomal subunit; IBA:GO_Central.
DR GO; GO:0015935; C:small ribosomal subunit; IBA:GO_Central.
DR GO; GO:0019843; F:rRNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0045903; P:positive regulation of translational fidelity; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd00165; S4; 1.
DR Gene3D; 3.10.290.10; -; 1.
DR InterPro; IPR022801; Ribosomal_S4/S9.
DR InterPro; IPR005710; Ribosomal_S4/S9_euk/arc.
DR InterPro; IPR001912; Ribosomal_S4/S9_N.
DR InterPro; IPR018079; Ribosomal_S4_CS.
DR InterPro; IPR002942; S4_RNA-bd.
DR InterPro; IPR036986; S4_RNA-bd_sf.
DR PANTHER; PTHR11831; PTHR11831; 1.
DR Pfam; PF00163; Ribosomal_S4; 1.
DR Pfam; PF01479; S4; 1.
DR SMART; SM01390; Ribosomal_S4; 1.
DR TIGRFAMs; TIGR01018; uS4_arch; 1.
DR PROSITE; PS00632; RIBOSOMAL_S4; 1.
DR PROSITE; PS50889; S4; 1.
PE 3: Inferred from homology;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT CHAIN 1..189
FT /note="40S ribosomal protein S9"
FT /id="PRO_0000132693"
FT DOMAIN 107..181
FT /note="S4 RNA-binding"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00182"
FT REGION 161..189
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 189 AA; 21957 MW; 160430FBBECECD6B CRC64;
MARLKTVQSK VTKSPRRPFE KERLDQELKL IGTFGLKNKR EVWRVKYTLA KVRKAARELL
TLEDKDPKRL FEGNALLRRL VKIGVLDETK MKLDYVLGLK VEDFLERRLQ TQVFKLGLAK
SIHHARILIK QHHIRVRRQV VDVPSFIVRL DSQKHIDFSL QSPYGGGRPG RVKRRTLRKG
DGAGGDDEE