RSBNL_XENTR
ID RSBNL_XENTR Reviewed; 782 AA.
AC Q28DE6;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 04-APR-2006, sequence version 1.
DT 03-AUG-2022, entry version 69.
DE RecName: Full=Lysine-specific demethylase RSBN1L {ECO:0000305};
DE EC=1.14.11.- {ECO:0000250|UniProtKB:Q80T69};
DE AltName: Full=Round spermatid basic protein 1-like;
GN Name=rsbn1l; ORFNames=TEgg039d07.1;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Egg;
RG Sanger Xenopus tropicalis EST/cDNA project;
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Lysine-specific demethylase that specifically demethylates
CC methylated lysine residues of proteins. {ECO:0000250|UniProtKB:Q80T69}.
CC -!- COFACTOR:
CC Name=Fe(2+); Xref=ChEBI:CHEBI:29033;
CC Evidence={ECO:0000250|UniProtKB:Q80T69};
CC Note=Binds 1 Fe(2+) ion per subunit. {ECO:0000250|UniProtKB:Q9GRZ3};
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q9GRZ3}.
CC -!- SIMILARITY: Belongs to the round spermatid basic protein 1 family.
CC {ECO:0000305}.
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DR EMBL; CR855556; CAJ82228.1; -; mRNA.
DR RefSeq; NP_001017304.1; NM_001017304.2.
DR AlphaFoldDB; Q28DE6; -.
DR SMR; Q28DE6; -.
DR STRING; 8364.ENSXETP00000042710; -.
DR PaxDb; Q28DE6; -.
DR PRIDE; Q28DE6; -.
DR Ensembl; ENSXETT00000042710; ENSXETP00000042710; ENSXETG00000019725.
DR GeneID; 550058; -.
DR KEGG; xtr:550058; -.
DR CTD; 222194; -.
DR Xenbase; XB-GENE-5732741; rsbn1l.
DR eggNOG; KOG4425; Eukaryota.
DR HOGENOM; CLU_009952_0_1_1; -.
DR InParanoid; Q28DE6; -.
DR OMA; VQNNLRR; -.
DR OrthoDB; 930910at2759; -.
DR PhylomeDB; Q28DE6; -.
DR TreeFam; TF323256; -.
DR Proteomes; UP000008143; Chromosome 3.
DR Proteomes; UP000790000; Unplaced.
DR Bgee; ENSXETG00000019725; Expressed in 2-cell stage embryo and 14 other tissues.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0051213; F:dioxygenase activity; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR InterPro; IPR026306; RSBN1/Dpy-21.
DR PANTHER; PTHR13354; PTHR13354; 1.
PE 2: Evidence at transcript level;
KW Dioxygenase; Iron; Metal-binding; Nucleus; Oxidoreductase;
KW Reference proteome.
FT CHAIN 1..782
FT /note="Lysine-specific demethylase RSBN1L"
FT /id="PRO_0000299415"
FT REGION 1..223
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 645..669
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 44..59
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 71..99
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 103..127
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 149..199
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 200..222
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 654..669
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 515
FT /ligand="2-oxoglutarate"
FT /ligand_id="ChEBI:CHEBI:16810"
FT /evidence="ECO:0000250|UniProtKB:Q9GRZ3"
FT BINDING 518
FT /ligand="Fe cation"
FT /ligand_id="ChEBI:CHEBI:24875"
FT /ligand_note="catalytic"
FT /evidence="ECO:0000250|UniProtKB:Q9GRZ3"
FT BINDING 520
FT /ligand="Fe cation"
FT /ligand_id="ChEBI:CHEBI:24875"
FT /ligand_note="catalytic"
FT /evidence="ECO:0000250|UniProtKB:Q9GRZ3"
FT BINDING 612
FT /ligand="2-oxoglutarate"
FT /ligand_id="ChEBI:CHEBI:16810"
FT /evidence="ECO:0000250|UniProtKB:Q9GRZ3"
FT BINDING 620
FT /ligand="Fe cation"
FT /ligand_id="ChEBI:CHEBI:24875"
FT /ligand_note="catalytic"
FT /evidence="ECO:0000250|UniProtKB:Q9GRZ3"
SQ SEQUENCE 782 AA; 88747 MW; 8D2FE42B87BFF246 CRC64;
MAELWTSIGA APAEKQEQPP KPRDVILVKS PALLSSTSSS DLHPLKKIRT DDKCLKPKRV
NGEGGGGNSK GGPGHSSSVT WSFPQGASSS SSSLCLGNPG KTEKPTKPRE KRDKEKKRRR
EGGGEENGEV KTAGIPCLPA ASPVTAVRNE IKIKDKEKQK EKKKHKLMNE IKKENGEVKL
LQKGTNEKPR PNAEDLQIKK VKKKKKKKHK EGEKRKHPKM HSKSIQTICS GLVSDAENNQ
FKEAKVEKDV YFMGLLGKTE VKKVKVEKEI PFVSLKEPRV EHKLKCLDSL EFKHLIHIEH
QPNGGASLIH AYSSELSQLS PVEMERFSEE FVTLVFSENE NCAAFYVMGI VHGAATYLPD
FLDYFSFNFP NSPVKMEILG KKDIETTTIS NFHAQVKRTY SHGTYRAGAM RQISLVGAVD
EEVGDYFPEF LDMLETSPFL KRTLPWGTCS SLQLKSRKES DDGPIMWVRP GEQMIPVADM
PKSPFKRKRT TNEIKNLQYL PRASEPREML FEDRTRAHAD HIGQGFERET TAAVGVLKAV
HCVEWNENPR ITKDVICFHA EDFLEVVQRL QLDLHEPPLS QCVQWVDDAK LNQLRREGIR
YARIQLYDDD IYFIPRNVVH QFKTVSAVCS LAWHIRLKMY HPESAATQNS DNLEETESGK
ETKADIERRD KTLYSSSTYT CNVQFKDPKQ KPPQIKHEQT YPLQTSEECG NINLPTISPA
PTECHTFETK TDYTTDTPVK NEMESTLELI NQDFADRHVT PKDTRQHILT NSVIRTEEEN
MC