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BBS4_DROME
ID   BBS4_DROME              Reviewed;         486 AA.
AC   A1Z8E9;
DT   17-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT   06-FEB-2007, sequence version 1.
DT   03-AUG-2022, entry version 104.
DE   RecName: Full=Bardet-Biedl syndrome 4 protein homolog;
GN   Name=BBS4; ORFNames=CG13232;
OS   Drosophila melanogaster (Fruit fly).
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC   Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC   Drosophilidae; Drosophila; Sophophora.
OX   NCBI_TaxID=7227;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Berkeley;
RX   PubMed=10731132; DOI=10.1126/science.287.5461.2185;
RA   Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
RA   Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
RA   George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
RA   Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X., Brandon R.C.,
RA   Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C.,
RA   Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A.,
RA   An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A.,
RA   Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V.,
RA   Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J.,
RA   Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E.,
RA   Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B.,
RA   Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I.,
RA   Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C.,
RA   Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S.,
RA   Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M.,
RA   Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
RA   Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D.,
RA   Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F.,
RA   Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D.,
RA   Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A.,
RA   Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C.,
RA   McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C.,
RA   Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L.,
RA   Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R.,
RA   Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V.,
RA   Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F.,
RA   Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J.,
RA   Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R.,
RA   Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y.,
RA   Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T.,
RA   Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S.,
RA   Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W.,
RA   Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M.,
RA   Venter J.C.;
RT   "The genome sequence of Drosophila melanogaster.";
RL   Science 287:2185-2195(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=Berkeley;
RX   PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083;
RA   Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
RA   Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
RA   Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P.,
RA   Bettencourt B.R., Celniker S.E., de Grey A.D.N.J., Drysdale R.A.,
RA   Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M.,
RA   Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.;
RT   "Annotation of the Drosophila melanogaster euchromatic genome: a systematic
RT   review.";
RL   Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
CC   -!- FUNCTION: May be required for microtubule anchoring at the centrosome.
CC       Required for ciliogenesis (By similarity). {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton, microtubule organizing
CC       center, centrosome {ECO:0000250}. Cytoplasm, cytoskeleton
CC       {ECO:0000250}. Cell projection, cilium membrane {ECO:0000250}.
CC   -!- SIMILARITY: Belongs to the BBS4 family. {ECO:0000305}.
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DR   EMBL; AE013599; AAF58718.1; -; Genomic_DNA.
DR   RefSeq; NP_610636.1; NM_136792.2.
DR   AlphaFoldDB; A1Z8E9; -.
DR   SMR; A1Z8E9; -.
DR   STRING; 7227.FBpp0087297; -.
DR   PaxDb; A1Z8E9; -.
DR   EnsemblMetazoa; FBtr0088202; FBpp0087297; FBgn0033578.
DR   GeneID; 36167; -.
DR   KEGG; dme:Dmel_CG13232; -.
DR   CTD; 585; -.
DR   FlyBase; FBgn0033578; BBS4.
DR   VEuPathDB; VectorBase:FBgn0033578; -.
DR   eggNOG; KOG1124; Eukaryota.
DR   GeneTree; ENSGT00940000173860; -.
DR   HOGENOM; CLU_033477_0_1_1; -.
DR   InParanoid; A1Z8E9; -.
DR   OMA; WNNIGAC; -.
DR   OrthoDB; 609083at2759; -.
DR   PhylomeDB; A1Z8E9; -.
DR   Reactome; R-DME-5620922; BBSome-mediated cargo-targeting to cilium.
DR   BioGRID-ORCS; 36167; 0 hits in 1 CRISPR screen.
DR   GenomeRNAi; 36167; -.
DR   PRO; PR:A1Z8E9; -.
DR   Proteomes; UP000000803; Chromosome 2R.
DR   Bgee; FBgn0033578; Expressed in antenna and 3 other tissues.
DR   ExpressionAtlas; A1Z8E9; baseline and differential.
DR   Genevisible; A1Z8E9; DM.
DR   GO; GO:0034464; C:BBSome; ISS:FlyBase.
DR   GO; GO:0036064; C:ciliary basal body; IBA:GO_Central.
DR   GO; GO:0060170; C:ciliary membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0005929; C:cilium; ISS:FlyBase.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR   GO; GO:0000242; C:pericentriolar material; ISS:UniProtKB.
DR   GO; GO:0034452; F:dynactin binding; ISS:FlyBase.
DR   GO; GO:0030674; F:protein-macromolecule adaptor activity; ISS:UniProtKB.
DR   GO; GO:0007098; P:centrosome cycle; ISS:UniProtKB.
DR   GO; GO:0060271; P:cilium assembly; IEP:FlyBase.
DR   GO; GO:0061512; P:protein localization to cilium; IBA:GO_Central.
DR   Gene3D; 1.25.40.10; -; 2.
DR   InterPro; IPR028786; BBS4.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   InterPro; IPR019734; TPR_repeat.
DR   PANTHER; PTHR44186; PTHR44186; 1.
DR   SMART; SM00028; TPR; 7.
DR   SUPFAM; SSF48452; SSF48452; 2.
DR   PROSITE; PS50005; TPR; 8.
DR   PROSITE; PS50293; TPR_REGION; 1.
PE   3: Inferred from homology;
KW   Cell membrane; Cell projection; Cilium; Cytoplasm; Cytoskeleton; Membrane;
KW   Reference proteome; Repeat; TPR repeat.
FT   CHAIN           1..486
FT                   /note="Bardet-Biedl syndrome 4 protein homolog"
FT                   /id="PRO_0000284045"
FT   REPEAT          33..66
FT                   /note="TPR 1"
FT   REPEAT          67..100
FT                   /note="TPR 2"
FT   REPEAT          101..134
FT                   /note="TPR 3"
FT   REPEAT          143..179
FT                   /note="TPR 4"
FT   REPEAT          180..213
FT                   /note="TPR 5"
FT   REPEAT          215..247
FT                   /note="TPR 6"
FT   REPEAT          249..282
FT                   /note="TPR 7"
FT   REPEAT          283..316
FT                   /note="TPR 8"
FT   REPEAT          318..350
FT                   /note="TPR 9"
FT   REPEAT          352..384
FT                   /note="TPR 10"
SQ   SEQUENCE   486 AA;  55632 MW;  A05176607D595430 CRC64;
     MYEPGTEQIN CNGRLIELPT LEVVRPAPKM PSDANIDWLL HIYFTRREFT RCRRLIEREL
     NRHLNPEYLY FVQGLIDREE GNHIEALRHL QKSAELNPRN IETYKEIGRT LYIMGRFSQA
     LGVFREAEQR SSRQDHEIYH YLGELLYRAA TTQSQKDVAS QQQDEARTYF ELAVQSGRKL
     ESYVRLAELY RKDKQYQKAI EILENCLHLT PENSEVLIEI SVLYLKINET QKAHDRLAEV
     VSIERKCSPK GLLAFGAILQ SRNDIDGALS KYSQIANAEP EIAELWNNIG LCFFKKQKFI
     VAISSLRKSV WLSPLNYNAL YNLSLIYIAS EQYASAFHTL AAAINLRKDN AECYMLLGLC
     LRKLDDMENA FVALERASSM ATGQQGAGRN PLVVLNFALF CYETGRLALS TEQYNRFMSQ
     AQDLLLPTEY KFQATKLKSL LRISNQGNGI LLDSADMGES DLGHNRATEL LPDELPLEVN
     AVVSQN
 
 
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