RSBZ5_ORYSJ
ID RSBZ5_ORYSJ Reviewed; 295 AA.
AC Q654B3; Q9AVC9;
DT 30-AUG-2017, integrated into UniProtKB/Swiss-Prot.
DT 25-OCT-2004, sequence version 1.
DT 03-AUG-2022, entry version 128.
DE RecName: Full=bZIP transcription factor RISBZ5 {ECO:0000305};
DE AltName: Full=Rice seed bZIP5 {ECO:0000305};
DE AltName: Full=bZIP transcription factor 52 {ECO:0000303|PubMed:18065552};
DE Short=OsbZIP52 {ECO:0000303|PubMed:18065552};
GN Name=RISBZ5 {ECO:0000303|PubMed:11133985};
GN Synonyms=BZIP52 {ECO:0000303|PubMed:18065552};
GN OrderedLocusNames=Os06g0662200 {ECO:0000312|EMBL:BAF20195.1},
GN LOC_Os06g45140 {ECO:0000305};
GN ORFNames=OsJ_22252 {ECO:0000312|EMBL:EEE66169.1},
GN OSJNBb0065C04.12 {ECO:0000312|EMBL:BAD45854.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, AND DEVELOPMENTAL STAGE.
RX PubMed=11133985; DOI=10.1074/jbc.m007405200;
RA Onodera Y., Suzuki A., Wu C.Y., Washida H., Takaiwa F.;
RT "A rice functional transcriptional activator, RISBZ1, responsible for
RT endosperm-specific expression of storage protein genes through GCN4
RT motif.";
RL J. Biol. Chem. 276:14139-14152(2001).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [6]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=18065552; DOI=10.1104/pp.107.112821;
RA Nijhawan A., Jain M., Tyagi A.K., Khurana J.P.;
RT "Genomic survey and gene expression analysis of the basic leucine zipper
RT transcription factor family in rice.";
RL Plant Physiol. 146:333-350(2008).
RN [7]
RP FUNCTION, HOMODIMERIZATION, SUBCELLULAR LOCATION, AND INDUCTION BY COLD
RP STRESS.
RX PubMed=22189955; DOI=10.1007/s00425-011-1564-z;
RA Liu C., Wu Y., Wang X.;
RT "bZIP transcription factor OsbZIP52/RISBZ5: a potential negative regulator
RT of cold and drought stress response in rice.";
RL Planta 235:1157-1169(2012).
CC -!- FUNCTION: Probable transcription factor that binds to the DNA specific
CC sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters
CC (PubMed:11133985). May function as a negative regulator in cold and
CC drought stress responses (PubMed:22189955).
CC {ECO:0000269|PubMed:11133985, ECO:0000269|PubMed:22189955}.
CC -!- SUBUNIT: Homodimer. {ECO:0000269|PubMed:22189955}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00978,
CC ECO:0000269|PubMed:22189955}.
CC -!- DEVELOPMENTAL STAGE: Expressed in developing seeds at low levels from 5
CC to 20 days after flowering (DAF). {ECO:0000269|PubMed:11133985}.
CC -!- INDUCTION: Induced by cold stress in roots.
CC {ECO:0000269|PubMed:22189955}.
CC -!- MISCELLANEOUS: Plants over-expressing RISBZ5/BZIP52 showed
CC significantly increased sensitivity to cold and drought stresses.
CC {ECO:0000269|PubMed:22189955}.
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DR EMBL; AB053474; BAB39175.1; -; mRNA.
DR EMBL; AP004744; BAD45854.1; -; Genomic_DNA.
DR EMBL; AP008212; BAF20195.1; -; Genomic_DNA.
DR EMBL; AP014962; BAS98995.1; -; Genomic_DNA.
DR EMBL; CM000143; EEE66169.1; -; Genomic_DNA.
DR RefSeq; XP_015643805.1; XM_015788319.1.
DR AlphaFoldDB; Q654B3; -.
DR SMR; Q654B3; -.
DR STRING; 4530.OS06T0662200-01; -.
DR PaxDb; Q654B3; -.
DR PRIDE; Q654B3; -.
DR EnsemblPlants; Os06t0662200-01; Os06t0662200-01; Os06g0662200.
DR GeneID; 4341753; -.
DR Gramene; Os06t0662200-01; Os06t0662200-01; Os06g0662200.
DR KEGG; osa:4341753; -.
DR eggNOG; ENOG502QS0A; Eukaryota.
DR HOGENOM; CLU_057781_0_0_1; -.
DR InParanoid; Q654B3; -.
DR OMA; LNSRKMC; -.
DR OrthoDB; 1446419at2759; -.
DR Proteomes; UP000000763; Chromosome 6.
DR Proteomes; UP000007752; Chromosome 6.
DR Proteomes; UP000059680; Chromosome 6.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR InterPro; IPR004827; bZIP.
DR InterPro; IPR046347; bZIP_sf.
DR InterPro; IPR044168; RISBZ3/4/5.
DR PANTHER; PTHR47693; PTHR47693; 1.
DR Pfam; PF00170; bZIP_1; 1.
DR SMART; SM00338; BRLZ; 1.
DR SUPFAM; SSF57959; SSF57959; 1.
DR PROSITE; PS50217; BZIP; 1.
DR PROSITE; PS00036; BZIP_BASIC; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Stress response; Transcription;
KW Transcription regulation.
FT CHAIN 1..295
FT /note="bZIP transcription factor RISBZ5"
FT /id="PRO_0000441226"
FT DOMAIN 134..197
FT /note="bZIP"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00978"
FT REGION 16..157
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 136..155
FT /note="Basic motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00978"
FT REGION 162..176
FT /note="Leucine-zipper"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00978"
FT COMPBIAS 94..108
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 109..145
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 295 AA; 31926 MW; F5798DE431104FDF CRC64;
MMKKCPSELQ LEAFIREEAG AGDRKPGVLS PGDGARKSGL FSPGDGEMSV LDQSTLDGSG
GGHQLWWPES VRTPPRAAAA FSATADERTP ASISDDPKPT TSANHAPESD SDSDCDSLLE
AERSPRLRGT KSTETKRIRR MVSNRESARR SRRRKQAQLS ELESQVEQLK GENSSLFKQL
TESSQQFNTA VTDNRILKSD VEALRVKVKM AEDMVARAAM SCGLGQLGLA PLLSSRKMCQ
ALDMLSLPRN DACGFKGLNL GRQVQNSPVQ SAASLESLDN RISSEVTSCS ADVWP
