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RSEA_SALT1
ID   RSEA_SALT1              Reviewed;         216 AA.
AC   D0ZSY8;
DT   22-JAN-2014, integrated into UniProtKB/Swiss-Prot.
DT   19-JAN-2010, sequence version 1.
DT   03-AUG-2022, entry version 57.
DE   RecName: Full=Anti-sigma-E factor RseA;
DE   AltName: Full=Regulator of SigE;
DE   AltName: Full=Sigma-E anti-sigma factor RseA;
DE   AltName: Full=Sigma-E factor negative regulatory protein;
GN   Name=rseA; OrderedLocusNames=STM14_3233;
OS   Salmonella typhimurium (strain 14028s / SGSC 2262).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Salmonella.
OX   NCBI_TaxID=588858;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=14028s / SGSC 2262;
RX   PubMed=19897643; DOI=10.1128/jb.01233-09;
RA   Jarvik T., Smillie C., Groisman E.A., Ochman H.;
RT   "Short-term signatures of evolutionary change in the Salmonella enterica
RT   serovar typhimurium 14028 genome.";
RL   J. Bacteriol. 192:560-567(2010).
RN   [2]
RP   ACTIVITY REGULATION, PROBABLE CLEAVAGE BY DEGS AND RSEP, DISRUPTION
RP   PHENOTYPE, AND FUNCTION.
RC   STRAIN=14028s / SGSC 2262;
RX   PubMed=19170886; DOI=10.1111/j.1365-2958.2009.06597.x;
RA   Muller C., Bang I.S., Velayudhan J., Karlinsey J., Papenfort K., Vogel J.,
RA   Fang F.C.;
RT   "Acid stress activation of the sigma(E) stress response in Salmonella
RT   enterica serovar Typhimurium.";
RL   Mol. Microbiol. 71:1228-1238(2009).
CC   -!- FUNCTION: An anti-sigma factor for extracytoplasmic function (ECF)
CC       sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive
CC       form by an anti-sigma factor until released by regulated intramembrane
CC       proteolysis (RIP). RIP occurs when an extracytoplasmic signal
CC       (periplasmic or acid stress or heat shock) triggers a concerted
CC       proteolytic cascade to transmit information and elicit cellular
CC       responses. The membrane-spanning regulatory substrate protein is first
CC       cut periplasmically (site-1 protease, S1P, DegS), then within the
CC       membrane itself (site-2 protease, S2P, RseP), while cytoplasmic
CC       proteases finish degrading the anti-sigma factor, liberating sigma-E
CC       (Probable). In this organism acid stress response does not require DegS
CC       degradation. {ECO:0000269|PubMed:19170886, ECO:0000305}.
CC   -!- ACTIVITY REGULATION: Responds differently to heat shock versus acid
CC       shock; degradation in response to heat shock requires sequential DegS
CC       and RseP action, whereas degradation in response to acid shock requires
CC       only RseP. {ECO:0000269|PubMed:19170886}.
CC   -!- SUBUNIT: Interacts 1:1 with ECF RNA polymerase sigma-E (RpoE); this
CC       inhibits the interaction of sigma-E with the RNA polymerase catalytic
CC       core and leads to a decreased expression of sigma-E-regulated genes.
CC       Interacts with RseB (By similarity). {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000250}; Single-pass
CC       type II membrane protein {ECO:0000250}.
CC   -!- PTM: Sequentially cleaved by DegS (a site-1 protease) in its
CC       periplasmic domain between Val-148 and Ser-149, then by RseP (a site-2
CC       protease) between positions Ala-108 and Cys-109. The N-terminal
CC       fragment is then degraded by primarily ClpX-ClpP in an ATP-dependent
CC       fashion. Sequential cleavage by DegS, RseP and ClpX-ClpP frees RpoE
CC       from RseA (Probable). {ECO:0000305}.
CC   -!- DISRUPTION PHENOTYPE: Derepression and constitutive activation of
CC       sigma-E function, consequently loss of acid stress response.
CC       {ECO:0000269|PubMed:19170886}.
CC   -!- SIMILARITY: Belongs to the RseA family. {ECO:0000305}.
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DR   EMBL; CP001363; ACY89662.1; -; Genomic_DNA.
DR   RefSeq; WP_001168374.1; NZ_CP043402.1.
DR   AlphaFoldDB; D0ZSY8; -.
DR   SMR; D0ZSY8; -.
DR   EnsemblBacteria; ACY89662; ACY89662; STM14_3233.
DR   KEGG; seo:STM14_3233; -.
DR   PATRIC; fig|588858.6.peg.3000; -.
DR   HOGENOM; CLU_108851_1_0_6; -.
DR   OMA; PEWNIAE; -.
DR   BioCyc; SENT588858:STM14_RS14450-MON; -.
DR   Proteomes; UP000002695; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0016989; F:sigma factor antagonist activity; IEA:InterPro.
DR   GO; GO:0097533; P:cellular stress response to acid chemical; IMP:UniProtKB.
DR   CDD; cd16328; RseA_N; 1.
DR   Gene3D; 1.10.10.880; -; 1.
DR   InterPro; IPR005573; Anti-sigma_E_RseA_C.
DR   InterPro; IPR005572; Anti-sigma_E_RseA_N.
DR   InterPro; IPR036147; Anti-sigma_E_RseA_N_sf.
DR   InterPro; IPR026279; RseA.
DR   Pfam; PF03873; RseA_C; 1.
DR   Pfam; PF03872; RseA_N; 1.
DR   PIRSF; PIRSF016938; RseA; 1.
DR   SUPFAM; SSF89069; SSF89069; 1.
PE   1: Evidence at protein level;
KW   Cell inner membrane; Cell membrane; Coiled coil; Membrane; Signal-anchor;
KW   Transmembrane; Transmembrane helix.
FT   CHAIN           1..216
FT                   /note="Anti-sigma-E factor RseA"
FT                   /id="PRO_0000424884"
FT   TOPO_DOM        1..104
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        105..121
FT                   /note="Helical; Signal-anchor for type II membrane protein"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        122..216
FT                   /note="Periplasmic"
FT                   /evidence="ECO:0000255"
FT   REGION          147..166
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          161..202
FT                   /evidence="ECO:0000255"
FT   SITE            108..109
FT                   /note="Cleavage; by RseP"
FT                   /evidence="ECO:0000250"
FT   SITE            148..149
FT                   /note="Cleavage; by DegS"
FT                   /evidence="ECO:0000250"
SQ   SEQUENCE   216 AA;  24223 MW;  66E1BF61BD7EDC87 CRC64;
     MQKEKLSALM DGETLDSELL KALTHDPEMQ KTWESYHLIR DSMRGDTPDV LHFDISARVM
     AAIENEPVRQ VSPLIPEAQP APQQWQKMPF WKKVRPWAAQ LTQMGVAACV SLAVIVGVQH
     YNGQSETSQQ PETPVFNTLP MMGKASPVSL GVPSEAAPVG SQQQQVQEQR RRINAMLQDY
     ELQRRLHSEQ LQFEQAQTQQ AAVQVPGIQT LGTQSQ
 
 
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