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RSEP_ECOLI
ID   RSEP_ECOLI              Reviewed;         450 AA.
AC   P0AEH1; P37764;
DT   06-DEC-2005, integrated into UniProtKB/Swiss-Prot.
DT   06-DEC-2005, sequence version 1.
DT   03-AUG-2022, entry version 136.
DE   RecName: Full=Regulator of sigma-E protease RseP;
DE            EC=3.4.24.-;
DE   AltName: Full=S2P endopeptidase;
DE   AltName: Full=Site-2 protease RseP;
DE            Short=S2P protease RseP;
DE   AltName: Full=Site-2-type intramembrane protease;
GN   Name=rseP; Synonyms=ecfE, yaeL; OrderedLocusNames=b0176, JW0171;
OS   Escherichia coli (strain K12).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=83333;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA], INDUCTION, AND DISRUPTION PHENOTYPE.
RX   PubMed=11274153; DOI=10.1074/jbc.m100464200;
RA   Dartigalongue C., Missiakas D., Raina S.;
RT   "Characterization of the Escherichia coli sigma E regulon.";
RL   J. Biol. Chem. 276:20866-20875(2001).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RA   Takemoto K., Mori H., Murayama N., Kataoka K., Yano M., Itoh T.,
RA   Yamamoto Y., Inokuchi H., Miki T., Hatada E., Fukuda R., Ichihara S.,
RA   Mizuno T., Makino K., Nakata A., Yura T., Sampei G., Mizobuchi K.;
RT   "Systematic sequencing of the Escherichia coli genome: analysis of the 4.0
RT   - 6.0 min (189,987 - 281,416bp) region.";
RL   Submitted (FEB-1996) to the EMBL/GenBank/DDBJ databases.
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / MG1655 / ATCC 47076;
RA   Chung E., Allen E., Araujo R., Aparicio A.M., Davis K., Duncan M.,
RA   Federspiel N., Hyman R., Kalman S., Komp C., Kurdi O., Lew H., Lin D.,
RA   Namath A., Oefner P., Roberts D., Schramm S., Davis R.W.;
RT   "Sequence of minutes 4-25 of Escherichia coli.";
RL   Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / MG1655 / ATCC 47076;
RX   PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA   Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA   Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA   Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA   Shao Y.;
RT   "The complete genome sequence of Escherichia coli K-12.";
RL   Science 277:1453-1462(1997).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX   PubMed=16738553; DOI=10.1038/msb4100049;
RA   Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA   Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT   "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT   and W3110.";
RL   Mol. Syst. Biol. 2:E1-E5(2006).
RN   [6]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-103.
RX   PubMed=2995358; DOI=10.1016/s0021-9258(17)38988-3;
RA   Icho T., Sparrow C.P., Raetz C.R.H.;
RT   "Molecular cloning and sequencing of the gene for CDP-diglyceride
RT   synthetase of Escherichia coli.";
RL   J. Biol. Chem. 260:12078-12083(1985).
RN   [7]
RP   IDENTIFICATION.
RX   PubMed=7984428; DOI=10.1093/nar/22.22.4756;
RA   Borodovsky M., Rudd K.E., Koonin E.V.;
RT   "Intrinsic and extrinsic approaches for detecting genes in a bacterial
RT   genome.";
RL   Nucleic Acids Res. 22:4756-4767(1994).
RN   [8]
RP   SUBCELLULAR LOCATION, DISRUPTION PHENOTYPE, AND MUTAGENESIS OF HIS-22.
RX   PubMed=11689431; DOI=10.1093/emboj/20.21.5908;
RA   Dartigalongue C., Loferer H., Raina S.;
RT   "EcfE, a new essential inner membrane protease: its role in the regulation
RT   of heat shock response in Escherichia coli.";
RL   EMBO J. 20:5908-5918(2001).
RN   [9]
RP   DISCUSSION OF FUNCTION, SUBCELLULAR LOCATION, TOPOLOGY, DOMAIN, DISRUPTION
RP   PHENOTYPE, AND MUTAGENESIS OF HIS-22; GLU-23; HIS-26; VAL-261 AND ASP-402.
RC   STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX   PubMed=11750129; DOI=10.1016/s0378-1119(01)00823-x;
RA   Kanehara K., Akiyama Y., Ito K.;
RT   "Characterization of the yaeL gene product and its S2P-protease motifs in
RT   Escherichia coli.";
RL   Gene 281:71-79(2001).
RN   [10]
RP   FUNCTION IN CLEAVAGE OF RSEA, DISRUPTION PHENOTYPE, AND MUTAGENESIS OF
RP   HIS-22 AND ASP-402.
RC   STRAIN=K12;
RX   PubMed=12183368; DOI=10.1101/gad.1002302;
RA   Kanehara K., Ito K., Akiyama Y.;
RT   "YaeL (EcfE) activates the sigma(E) pathway of stress response through a
RT   site-2 cleavage of anti-sigma(E), RseA.";
RL   Genes Dev. 16:2147-2155(2002).
RN   [11]
RP   FUNCTION IN THE CLEAVAGE OF RSEA, POSSIBLE ACTIVE SITE, DISRUPTION
RP   PHENOTYPE, AND MUTAGENESIS OF GLU-23.
RC   STRAIN=K12;
RX   PubMed=12183369; DOI=10.1101/gad.1008902;
RA   Alba B.M., Leeds J.A., Onufryk C., Lu C.Z., Gross C.A.;
RT   "DegS and YaeL participate sequentially in the cleavage of RseA to activate
RT   the sigma(E)-dependent extracytoplasmic stress response.";
RL   Genes Dev. 16:2156-2168(2002).
RN   [12]
RP   SUBCELLULAR LOCATION.
RC   STRAIN=K12 / JM109 / ATCC 53323;
RX   PubMed=11867724; DOI=10.1073/pnas.052018199;
RA   Drew D., Sjoestrand D., Nilsson J., Urbig T., Chin C.-N., de Gier J.-W.,
RA   von Heijne G.;
RT   "Rapid topology mapping of Escherichia coli inner-membrane proteins by
RT   prediction and PhoA/GFP fusion analysis.";
RL   Proc. Natl. Acad. Sci. U.S.A. 99:2690-2695(2002).
RN   [13]
RP   INTERACTION WITH RSEA, DOMAIN, AND MUTAGENESIS OF GLY-214; 234-ALA-ALA-235;
RP   GLY-243; ASP-244 AND ILE-246.
RC   STRAIN=K12 / AD16;
RX   PubMed=14633997; DOI=10.1093/emboj/cdg602;
RA   Kanehara K., Ito K., Akiyama Y.;
RT   "YaeL proteolysis of RseA is controlled by the PDZ domain of YaeL and a
RT   Gln-rich region of RseA.";
RL   EMBO J. 22:6389-6398(2003).
RN   [14]
RP   FUNCTION IN THE CLEAVAGE OF RSEA, AND MUTAGENESIS OF HIS-22.
RX   PubMed=15496982; DOI=10.1038/sj.emboj.7600449;
RA   Akiyama Y., Kanehara K., Ito K.;
RT   "RseP (YaeL), an Escherichia coli RIP protease, cleaves transmembrane
RT   sequences.";
RL   EMBO J. 23:4434-4442(2004).
RN   [15]
RP   SUBCELLULAR LOCATION.
RC   STRAIN=K12 / MG1655 / ATCC 47076;
RX   PubMed=15919996; DOI=10.1126/science.1109730;
RA   Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.;
RT   "Global topology analysis of the Escherichia coli inner membrane
RT   proteome.";
RL   Science 308:1321-1323(2005).
RN   [16]
RP   FUNCTION IN CLEAVAGE OF RSEA, INTERACTION WITH RSEA, SUBSTRATE RECOGNITION,
RP   AND MUTAGENESIS OF HIS-22; GLU-23; ASN-389; ASN-394; PRO-397 AND PRO-399.
RC   STRAIN=K12 / AD16;
RX   PubMed=18268014; DOI=10.1074/jbc.m709984200;
RA   Koide K., Ito K., Akiyama Y.;
RT   "Substrate recognition and binding by RseP, an Escherichia coli
RT   intramembrane protease.";
RL   J. Biol. Chem. 283:9562-9570(2008).
RN   [17]
RP   FUNCTION IN CLEAVAGE OF SIGNAL PEPTIDES, ACTIVITY REGULATION, AND
RP   MUTAGENESIS OF HIS-22.
RC   STRAIN=K12;
RX   PubMed=21810987; DOI=10.1073/pnas.1108376108;
RA   Saito A., Hizukuri Y., Matsuo E., Chiba S., Mori H., Nishimura O., Ito K.,
RA   Akiyama Y.;
RT   "Post-liberation cleavage of signal peptides is catalyzed by the site-2
RT   protease (S2P) in bacteria.";
RL   Proc. Natl. Acad. Sci. U.S.A. 108:13740-13745(2011).
RN   [18]
RP   DOMAIN, DISRUPTION PHENOTYPE, AND MUTAGENESIS OF ILE-215 AND ILE-304.
RC   STRAIN=K12;
RX   PubMed=23016873; DOI=10.1111/mmi.12053;
RA   Hizukuri Y., Akiyama Y.;
RT   "PDZ domains of RseP are not essential for sequential cleavage of RseA or
RT   stress-induced sigma(E) activation in vivo.";
RL   Mol. Microbiol. 86:1232-1245(2012).
RN   [19]
RP   X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS) OF 127-221, X-RAY CRYSTALLOGRAPHY
RP   (0.98 ANGSTROMS) OF 222-309, FUNCTION IN CLEAVAGE OF RSEA, DOMAIN, AND
RP   MUTAGENESIS OF ALA-115; ILE-145; LEU-151; TRP-162; LEU-169; LEU-213 AND
RP   GLY-214.
RC   STRAIN=K12;
RX   PubMed=18945679; DOI=10.1074/jbc.m806603200;
RA   Inaba K., Suzuki M., Maegawa K., Akiyama S., Ito K., Akiyama Y.;
RT   "A pair of circularly permutated PDZ domains control RseP, the S2P family
RT   intramembrane protease of Escherichia coli.";
RL   J. Biol. Chem. 283:35042-35052(2008).
RN   [20]
RP   X-RAY CRYSTALLOGRAPHY (1.67 ANGSTROMS) OF 127-220, X-RAY CRYSTALLOGRAPHY
RP   (1.60 ANGSTROMS) OF 222-307, DOMAIN, AND MUTAGENESIS OF ILE-215 AND
RP   ILE-304.
RX   PubMed=19706448; DOI=10.1073/pnas.0903289106;
RA   Li X., Wang B., Feng L., Kang H., Qi Y., Wang J., Shi Y.;
RT   "Cleavage of RseA by RseP requires a carboxyl-terminal hydrophobic amino
RT   acid following DegS cleavage.";
RL   Proc. Natl. Acad. Sci. U.S.A. 106:14837-14842(2009).
CC   -!- FUNCTION: A site-2 regulated intramembrane protease (S2P) that cleaves
CC       the peptide bond between 'Ala-108' and 'Cys-109' in the transmembrane
CC       region of RseA. Part of a regulated intramembrane proteolysis (RIP)
CC       cascade. Acts on DegS-cleaved RseA to release the cytoplasmic domain of
CC       RseA, residue 'Val-148' of RseA may be required for this. This provides
CC       the cell with sigma-E (RpoE) activity through the proteolysis of RseA.
CC       Can also cleave sequences in transmembrane regions of other proteins
CC       (such as LacY) as well as liberated signal peptides of beta-lactamase,
CC       OmpF, LivK, SecM, PhoA, LivJ, OmpC, Lpp and TorA, probably within the
CC       membrane. {ECO:0000269|PubMed:12183368, ECO:0000269|PubMed:12183369,
CC       ECO:0000269|PubMed:15496982, ECO:0000269|PubMed:18268014,
CC       ECO:0000269|PubMed:18945679, ECO:0000269|PubMed:21810987}.
CC   -!- COFACTOR:
CC       Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Evidence={ECO:0000305};
CC   -!- ACTIVITY REGULATION: Inhibited by Zn(2+) chelator 1,10-phenanthroline.
CC       {ECO:0000269|PubMed:21810987}.
CC   -!- SUBUNIT: Interacts with RseA; the third transmembrane domain can be
CC       cross-linked to the transmembrane domain of RseA.
CC       {ECO:0000269|PubMed:14633997, ECO:0000269|PubMed:18268014}.
CC   -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000269|PubMed:11689431,
CC       ECO:0000269|PubMed:11750129, ECO:0000269|PubMed:11867724,
CC       ECO:0000269|PubMed:15919996}; Multi-pass membrane protein
CC       {ECO:0000269|PubMed:11689431, ECO:0000269|PubMed:11750129,
CC       ECO:0000269|PubMed:11867724, ECO:0000269|PubMed:15919996}.
CC   -!- INDUCTION: Part of the sigma-E regulon. Also has a primary sigma-70
CC       factor promoter. {ECO:0000269|PubMed:11274153}.
CC   -!- DOMAIN: The 2 circularly premutated PDZ domains act to negatively
CC       regulate protease action on intact RseA; mutations in PDZ 1 (PDZ-N)
CC       have a more deleterious effect than similar mutations in PDZ 2 (PDZ-C).
CC       A 31 residue insertion in PDZ-C (between Val-261 and Met-262) domain
CC       inhibits protease activity, whereas deletion of residues 203-279
CC       alleviates the PDZ-inhibition, allowing cleavage of intact RseA.
CC       {ECO:0000269|PubMed:11750129, ECO:0000269|PubMed:14633997,
CC       ECO:0000269|PubMed:18945679, ECO:0000269|PubMed:19706448,
CC       ECO:0000269|PubMed:23016873}.
CC   -!- DISRUPTION PHENOTYPE: Essential. Depletion experiments lead to
CC       cessation of growth, elongated cells and limited lysis, as well as
CC       decreased amounts of sigma-E. Not essential in an rseA deletion strain,
CC       when sigma-E is overexpressed or in ompA-ompC deletion strain. In the
CC       latter has severely decreased growth at 20 degrees Celsius.
CC       Accumulation of an RseA proteolysis intermediate.
CC       {ECO:0000269|PubMed:11274153, ECO:0000269|PubMed:11689431,
CC       ECO:0000269|PubMed:11750129, ECO:0000269|PubMed:12183368,
CC       ECO:0000269|PubMed:12183369, ECO:0000269|PubMed:23016873}.
CC   -!- MISCELLANEOUS: Regulated intramembrane proteolysis (RIP) occurs when an
CC       extracytoplasmic signal triggers a concerted proteolytic cascade to
CC       transmit information and elicit cellular responses. A membrane-spanning
CC       regulatory substrate protein is first cut extracytoplasmically (site-1
CC       protease, S1P), then within the membrane itself (site-2 protease, S2P,
CC       this enzyme), while cytoplasmic proteases finish degrading the
CC       regulatory protein, liberating the effector protein.
CC   -!- SIMILARITY: Belongs to the peptidase M50B family. {ECO:0000305}.
CC   -!- CAUTION: Was originally thought to be a negative regulator of sigma-E
CC       function and to act directly on sigma-E and RpoH; this may not be
CC       physiologically relevant. {ECO:0000305|PubMed:11689431}.
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DR   EMBL; AF407012; AAL01378.1; -; Genomic_DNA.
DR   EMBL; U70214; AAB08605.1; -; Genomic_DNA.
DR   EMBL; U00096; AAC73287.1; -; Genomic_DNA.
DR   EMBL; AP009048; BAA77851.1; -; Genomic_DNA.
DR   EMBL; M11330; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   PIR; H64741; H64741.
DR   RefSeq; NP_414718.1; NC_000913.3.
DR   RefSeq; WP_001295561.1; NZ_STEB01000032.1.
DR   PDB; 2ZPL; X-ray; 1.70 A; A/B/C=127-221.
DR   PDB; 2ZPM; X-ray; 0.98 A; A=222-309.
DR   PDB; 3ID1; X-ray; 1.67 A; A=127-220.
DR   PDB; 3ID2; X-ray; 3.09 A; A/B=222-309.
DR   PDB; 3ID3; X-ray; 2.01 A; A/B=222-309.
DR   PDB; 3ID4; X-ray; 1.60 A; A=222-307.
DR   PDBsum; 2ZPL; -.
DR   PDBsum; 2ZPM; -.
DR   PDBsum; 3ID1; -.
DR   PDBsum; 3ID2; -.
DR   PDBsum; 3ID3; -.
DR   PDBsum; 3ID4; -.
DR   AlphaFoldDB; P0AEH1; -.
DR   SMR; P0AEH1; -.
DR   BioGRID; 4261736; 104.
DR   DIP; DIP-48061N; -.
DR   IntAct; P0AEH1; 2.
DR   STRING; 511145.b0176; -.
DR   MEROPS; M50.004; -.
DR   TCDB; 9.B.149.2.3; the m50 peptidase (m50-p) family.
DR   jPOST; P0AEH1; -.
DR   PaxDb; P0AEH1; -.
DR   PRIDE; P0AEH1; -.
DR   EnsemblBacteria; AAC73287; AAC73287; b0176.
DR   EnsemblBacteria; BAA77851; BAA77851; BAA77851.
DR   GeneID; 66671536; -.
DR   GeneID; 944871; -.
DR   KEGG; ecj:JW0171; -.
DR   KEGG; eco:b0176; -.
DR   PATRIC; fig|1411691.4.peg.2103; -.
DR   EchoBASE; EB2331; -.
DR   eggNOG; COG0750; Bacteria.
DR   HOGENOM; CLU_025778_0_2_6; -.
DR   InParanoid; P0AEH1; -.
DR   OMA; QYMVGFG; -.
DR   PhylomeDB; P0AEH1; -.
DR   BioCyc; EcoCyc:EG12436-MON; -.
DR   BioCyc; MetaCyc:EG12436-MON; -.
DR   EvolutionaryTrace; P0AEH1; -.
DR   PRO; PR:P0AEH1; -.
DR   Proteomes; UP000000318; Chromosome.
DR   Proteomes; UP000000625; Chromosome.
DR   GO; GO:0005887; C:integral component of plasma membrane; IDA:EcoliWiki.
DR   GO; GO:0005886; C:plasma membrane; IDA:EcoCyc.
DR   GO; GO:0043856; F:anti-sigma factor antagonist activity; IMP:EcoCyc.
DR   GO; GO:0045152; F:antisigma factor binding; IDA:EcoCyc.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0004222; F:metalloendopeptidase activity; IDA:EcoCyc.
DR   GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR   Gene3D; 2.30.42.10; -; 2.
DR   InterPro; IPR001478; PDZ.
DR   InterPro; IPR041489; PDZ_6.
DR   InterPro; IPR036034; PDZ_sf.
DR   InterPro; IPR004387; Pept_M50_Zn.
DR   InterPro; IPR008915; Peptidase_M50.
DR   PANTHER; PTHR42837; PTHR42837; 2.
DR   Pfam; PF17820; PDZ_6; 1.
DR   Pfam; PF02163; Peptidase_M50; 1.
DR   SMART; SM00228; PDZ; 2.
DR   SUPFAM; SSF50156; SSF50156; 2.
DR   TIGRFAMs; TIGR00054; TIGR00054; 1.
DR   PROSITE; PS50106; PDZ; 1.
DR   PROSITE; PS00142; ZINC_PROTEASE; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Cell inner membrane; Cell membrane; Hydrolase; Membrane;
KW   Metal-binding; Metalloprotease; Protease; Reference proteome; Repeat;
KW   Transmembrane; Transmembrane helix; Zinc.
FT   CHAIN           1..450
FT                   /note="Regulator of sigma-E protease RseP"
FT                   /id="PRO_0000088417"
FT   TRANSMEM        1..21
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        22..103
FT                   /note="Periplasmic"
FT                   /evidence="ECO:0000305|PubMed:11750129"
FT   TRANSMEM        104..124
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        125..375
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000305|PubMed:11750129"
FT   TRANSMEM        376..396
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        397..429
FT                   /note="Periplasmic"
FT                   /evidence="ECO:0000305|PubMed:11750129"
FT   TRANSMEM        430..450
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   DOMAIN          127..220
FT                   /note="PDZ 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00143"
FT   DOMAIN          222..309
FT                   /note="PDZ 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00143"
FT   ACT_SITE        23
FT                   /evidence="ECO:0000305"
FT   BINDING         22
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000305"
FT   BINDING         26
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU10095"
FT   MUTAGEN         22
FT                   /note="H->A: Loss of protease activity."
FT                   /evidence="ECO:0000269|PubMed:11689431,
FT                   ECO:0000269|PubMed:11750129, ECO:0000269|PubMed:12183368,
FT                   ECO:0000269|PubMed:15496982, ECO:0000269|PubMed:18268014,
FT                   ECO:0000269|PubMed:21810987"
FT   MUTAGEN         22
FT                   /note="H->F: Loss of protease activity of RseA and signal
FT                   peptides, does not complement deletion mutant. Binds
FT                   substrate."
FT                   /evidence="ECO:0000269|PubMed:11689431,
FT                   ECO:0000269|PubMed:11750129, ECO:0000269|PubMed:12183368,
FT                   ECO:0000269|PubMed:15496982, ECO:0000269|PubMed:18268014,
FT                   ECO:0000269|PubMed:21810987"
FT   MUTAGEN         23
FT                   /note="E->A: Low basal sigma-E activity, sigma-E not
FT                   induced. No proteolysis of RseA."
FT                   /evidence="ECO:0000269|PubMed:11750129,
FT                   ECO:0000269|PubMed:12183369, ECO:0000269|PubMed:18268014"
FT   MUTAGEN         23
FT                   /note="E->D: Behaves like wild-type in vivo, slight
FT                   reduction in RseA cleavage in vitro."
FT                   /evidence="ECO:0000269|PubMed:11750129,
FT                   ECO:0000269|PubMed:12183369, ECO:0000269|PubMed:18268014"
FT   MUTAGEN         23
FT                   /note="E->Q: Does not complement deletion mutant."
FT                   /evidence="ECO:0000269|PubMed:11750129,
FT                   ECO:0000269|PubMed:12183369, ECO:0000269|PubMed:18268014"
FT   MUTAGEN         23
FT                   /note="E->S: Loss of protease activity."
FT                   /evidence="ECO:0000269|PubMed:11750129,
FT                   ECO:0000269|PubMed:12183369, ECO:0000269|PubMed:18268014"
FT   MUTAGEN         26
FT                   /note="H->F: Does not complement deletion mutant."
FT                   /evidence="ECO:0000269|PubMed:11750129"
FT   MUTAGEN         115
FT                   /note="A->V: No effect. Cleaves RseA without previous DegS
FT                   cleavage; when associated with R-214."
FT                   /evidence="ECO:0000269|PubMed:18945679"
FT   MUTAGEN         145
FT                   /note="I->N: Cuts RseA without previous DegS cleavage."
FT                   /evidence="ECO:0000269|PubMed:18945679"
FT   MUTAGEN         151
FT                   /note="L->P: Cuts RseA without previous DegS cleavage."
FT                   /evidence="ECO:0000269|PubMed:18945679"
FT   MUTAGEN         162
FT                   /note="W->R: Cuts RseA without previous DegS cleavage."
FT                   /evidence="ECO:0000269|PubMed:18945679"
FT   MUTAGEN         169
FT                   /note="L->S: Cuts RseA without previous DegS cleavage."
FT                   /evidence="ECO:0000269|PubMed:18945679"
FT   MUTAGEN         213
FT                   /note="L->P: Cuts RseA without previous DegS cleavage."
FT                   /evidence="ECO:0000269|PubMed:18945679"
FT   MUTAGEN         214
FT                   /note="G->E,Q: Cuts RseA without previous DegS cleavage."
FT                   /evidence="ECO:0000269|PubMed:14633997,
FT                   ECO:0000269|PubMed:18945679"
FT   MUTAGEN         214
FT                   /note="G->R: Weakly cuts RseA without previous DegS
FT                   cleavage. Stronger cleavage; when associated with V-115."
FT                   /evidence="ECO:0000269|PubMed:14633997,
FT                   ECO:0000269|PubMed:18945679"
FT   MUTAGEN         215
FT                   /note="I->A: No cleavage of RseA in vitro
FT                   (PubMed:19706448), cleavage of RseA (PubMed:23016873) in
FT                   vivo."
FT                   /evidence="ECO:0000269|PubMed:19706448,
FT                   ECO:0000269|PubMed:23016873"
FT   MUTAGEN         234..235
FT                   /note="AA->KK: Cuts RseA without previous DegS cleavage."
FT                   /evidence="ECO:0000269|PubMed:14633997"
FT   MUTAGEN         243
FT                   /note="G->Q: Cuts RseA without previous DegS cleavage."
FT                   /evidence="ECO:0000269|PubMed:14633997"
FT   MUTAGEN         244
FT                   /note="D->K: Cuts RseA without previous DegS cleavage."
FT                   /evidence="ECO:0000269|PubMed:14633997"
FT   MUTAGEN         246
FT                   /note="I->Y: Cuts RseA without previous DegS cleavage."
FT                   /evidence="ECO:0000269|PubMed:14633997"
FT   MUTAGEN         261
FT                   /note="V->VTDSYTQVASWTEPFPFSIQGDPRSDQETAFV: Does not
FT                   complement deletion mutant."
FT                   /evidence="ECO:0000269|PubMed:11750129"
FT   MUTAGEN         304
FT                   /note="I->A: No cleavage of RseA in vitro
FT                   (PubMed:19706448), cleavage of RseA (PubMed:23016873) in
FT                   vivo."
FT                   /evidence="ECO:0000269|PubMed:19706448,
FT                   ECO:0000269|PubMed:23016873"
FT   MUTAGEN         389
FT                   /note="N->C,G,L: Decreased substrate binding, retains some
FT                   proteolytic activity."
FT                   /evidence="ECO:0000269|PubMed:18268014"
FT   MUTAGEN         389
FT                   /note="N->Q: No effect."
FT                   /evidence="ECO:0000269|PubMed:18268014"
FT   MUTAGEN         394
FT                   /note="N->C: Decreased substrate binding, retains some
FT                   proteolytic activity."
FT                   /evidence="ECO:0000269|PubMed:18268014"
FT   MUTAGEN         397
FT                   /note="P->C: Decreased substrate binding, retains some
FT                   proteolytic activity."
FT                   /evidence="ECO:0000269|PubMed:18268014"
FT   MUTAGEN         399
FT                   /note="P->C: Decreased substrate binding, retains some
FT                   proteolytic activity."
FT                   /evidence="ECO:0000269|PubMed:18268014"
FT   MUTAGEN         402
FT                   /note="D->N: Does not complement deletion mutant, loss of
FT                   protease activity."
FT                   /evidence="ECO:0000269|PubMed:11750129,
FT                   ECO:0000269|PubMed:12183368"
FT   STRAND          130..134
FT                   /evidence="ECO:0007829|PDB:3ID1"
FT   HELIX           139..142
FT                   /evidence="ECO:0007829|PDB:3ID1"
FT   STRAND          150..154
FT                   /evidence="ECO:0007829|PDB:3ID1"
FT   HELIX           162..171
FT                   /evidence="ECO:0007829|PDB:3ID1"
FT   TURN            172..174
FT                   /evidence="ECO:0007829|PDB:3ID1"
FT   STRAND          176..183
FT                   /evidence="ECO:0007829|PDB:3ID1"
FT   STRAND          191..196
FT                   /evidence="ECO:0007829|PDB:3ID1"
FT   TURN            204..206
FT                   /evidence="ECO:0007829|PDB:3ID1"
FT   HELIX           209..212
FT                   /evidence="ECO:0007829|PDB:3ID1"
FT   STRAND          215..217
FT                   /evidence="ECO:0007829|PDB:3ID1"
FT   STRAND          227..229
FT                   /evidence="ECO:0007829|PDB:2ZPM"
FT   STRAND          231..233
FT                   /evidence="ECO:0007829|PDB:3ID2"
FT   TURN            234..236
FT                   /evidence="ECO:0007829|PDB:2ZPM"
FT   STRAND          245..249
FT                   /evidence="ECO:0007829|PDB:2ZPM"
FT   HELIX           257..266
FT                   /evidence="ECO:0007829|PDB:2ZPM"
FT   STRAND          272..278
FT                   /evidence="ECO:0007829|PDB:2ZPM"
FT   STRAND          281..287
FT                   /evidence="ECO:0007829|PDB:2ZPM"
FT   STRAND          290..292
FT                   /evidence="ECO:0007829|PDB:2ZPM"
FT   STRAND          295..297
FT                   /evidence="ECO:0007829|PDB:3ID4"
FT   STRAND          299..301
FT                   /evidence="ECO:0007829|PDB:2ZPM"
FT   STRAND          304..307
FT                   /evidence="ECO:0007829|PDB:3ID4"
SQ   SEQUENCE   450 AA;  49071 MW;  81A93BC113FBB66C CRC64;
     MLSFLWDLAS FIVALGVLIT VHEFGHFWVA RRCGVRVERF SIGFGKALWR RTDKLGTEYV
     IALIPLGGYV KMLDERAEPV VPELRHHAFN NKSVGQRAAI IAAGPVANFI FAIFAYWLVF
     IIGVPGVRPV VGEIAANSIA AEAQIAPGTE LKAVDGIETP DWDAVRLQLV DKIGDESTTI
     TVAPFGSDQR RDVKLDLRHW AFEPDKEDPV SSLGIRPRGP QIEPVLENVQ PNSAASKAGL
     QAGDRIVKVD GQPLTQWVTF VMLVRDNPGK SLALEIERQG SPLSLTLIPE SKPGNGKAIG
     FVGIEPKVIP LPDEYKVVRQ YGPFNAIVEA TDKTWQLMKL TVSMLGKLIT GDVKLNNLSG
     PISIAKGAGM TAELGVVYYL PFLALISVNL GIINLFPLPV LDGGHLLFLA IEKIKGGPVS
     ERVQDFCYRI GSILLVLLMG LALFNDFSRL
 
 
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