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RSLE3_ORYSJ
ID   RSLE3_ORYSJ             Reviewed;         752 AA.
AC   Q75HY5; A0A0P0WRF7;
DT   09-JUL-2014, integrated into UniProtKB/Swiss-Prot.
DT   05-JUL-2004, sequence version 1.
DT   03-AUG-2022, entry version 109.
DE   RecName: Full=Zinc finger BED domain-containing protein RICESLEEPER 3;
DE   AltName: Full=Transposase-like protein RICESLEEPER 3;
GN   OrderedLocusNames=Os05g0583200, LOC_Os05g50640; ORFNames=OSJNBb0035N21.10;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16261349; DOI=10.1007/s00438-005-0039-y;
RA   Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J.,
RA   Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F.,
RA   Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.;
RT   "A fine physical map of the rice chromosome 5.";
RL   Mol. Genet. Genomics 274:337-345(2005).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
RN   [6]
RP   FUNCTION, AND SUBCELLULAR LOCATION.
RX   PubMed=23067104; DOI=10.1186/1471-2229-12-192;
RA   Knip M., de Pater S., Hooykaas P.J.;
RT   "The SLEEPER genes: a transposase-derived angiosperm-specific gene
RT   family.";
RL   BMC Plant Biol. 12:192-192(2012).
CC   -!- FUNCTION: Transposase-like protein that is essential for plant growth
CC       and development. May regulate global gene expression by recruiting
CC       other cellular factors. {ECO:0000269|PubMed:23067104}.
CC   -!- SUBUNIT: Homodimer. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:23067104}.
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DR   EMBL; AC134929; AAS16892.1; -; Genomic_DNA.
DR   EMBL; AP008211; BAF18359.1; -; Genomic_DNA.
DR   EMBL; AP014961; BAS95547.1; -; Genomic_DNA.
DR   EMBL; AK102230; BAG95453.1; -; mRNA.
DR   RefSeq; XP_015637732.1; XM_015782246.1.
DR   RefSeq; XP_015637733.1; XM_015782247.1.
DR   AlphaFoldDB; Q75HY5; -.
DR   STRING; 4530.OS05T0583200-01; -.
DR   PaxDb; Q75HY5; -.
DR   PRIDE; Q75HY5; -.
DR   EnsemblPlants; Os05t0583200-01; Os05t0583200-01; Os05g0583200.
DR   GeneID; 4339741; -.
DR   Gramene; Os05t0583200-01; Os05t0583200-01; Os05g0583200.
DR   KEGG; osa:4339741; -.
DR   eggNOG; KOG1121; Eukaryota.
DR   HOGENOM; CLU_009123_1_2_1; -.
DR   InParanoid; Q75HY5; -.
DR   OMA; EHEMGHE; -.
DR   OrthoDB; 223749at2759; -.
DR   Proteomes; UP000000763; Chromosome 5.
DR   Proteomes; UP000059680; Chromosome 5.
DR   Genevisible; Q75HY5; OS.
DR   GO; GO:0005634; C:nucleus; IDA:UniProtKB.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR   GO; GO:0009791; P:post-embryonic development; TAS:UniProtKB.
DR   InterPro; IPR045259; DAYSLEEPER-like.
DR   InterPro; IPR025525; hAT-like_transposase_RNase-H.
DR   InterPro; IPR008906; HATC_C_dom.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR003656; Znf_BED.
DR   InterPro; IPR036236; Znf_C2H2_sf.
DR   PANTHER; PTHR23272; PTHR23272; 1.
DR   Pfam; PF05699; Dimer_Tnp_hAT; 1.
DR   Pfam; PF14372; DUF4413; 1.
DR   Pfam; PF02892; zf-BED; 1.
DR   SUPFAM; SSF53098; SSF53098; 1.
DR   SUPFAM; SSF57667; SSF57667; 1.
DR   PROSITE; PS50808; ZF_BED; 1.
PE   2: Evidence at transcript level;
KW   DNA-binding; Metal-binding; Nucleus; Reference proteome; Transcription;
KW   Transcription regulation; Zinc; Zinc-finger.
FT   CHAIN           1..752
FT                   /note="Zinc finger BED domain-containing protein
FT                   RICESLEEPER 3"
FT                   /id="PRO_0000429564"
FT   ZN_FING         106..166
FT                   /note="BED-type"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT   REGION          647..733
FT                   /note="HATC (Hobo-Ac-Tam3) domain"
FT   BINDING         129
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT   BINDING         132
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT   BINDING         153
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT   BINDING         159
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
SQ   SEQUENCE   752 AA;  84675 MW;  99C0C71A6C9ACE61 CRC64;
     MCEPSGSDDA MVHASEMVDG DEMIHGNEMV VHDSVMIDGN EMVQENVMVH GSGEMVQGSE
     MVHNNEIIQV NDMIQVNEMV NGDKMAHGHE LVGVELTTPT ASRRRRKKSV VWEHFTIEEM
     PGGVSRASCN LCKQTFAYSC GSKISGTSHL KRHITLASCP MLKNEDMKLS LPLATVTNND
     GEGCAERVAK RHYRSTGYAN AMFDQDRTCS NLAKMIILHD YPLHIVEQRG FTAFIGSLQP
     RFRVIDVDTI EGQVHSVYQK ERENLMHVFS TVPGRISLTV RLWATSQTLG YISLAAQFID
     TEWRVHRRMV NFMMVSSPHS ENSLSEAIST SLSDWNMKDK LFTITLDNDP SSHDIYSANM
     INYLSNKKDN IMIKGQLFVV RCYAHILNTV AQDVIASVHS VIYHIRESIK FIKASSVHED
     KFAEIALQLE IPSAKTLCLD VTTQWNTTYL MLLAALDYQQ VFASLETCDG DYNEAPSTED
     WKKVEAACSY LSLLYDSAHN IMAAPNPTSN IFFHEAWKLQ SELSNAIAHE DPIFRSTAKI
     MHERFDKYWK DCNLVLAIAV VMDPRFKMKL VEFSYSKIHS VEAAKYVKVV DDAIHELYSE
     YATQGEANRD AHVTDNSAAV TPPNGDELLD FDIYLSEIAT SQPSISELEQ YLEEALMPRI
     QDFEILEWWK LNTIKFPTLS KMARDVLAIP MSMVSSGSSI FSATATGSQM LDDYRSSLRP
     ETVEALFCAK DWLQYPPATT EAPSTALVKM EN
 
 
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