RSMB_CAEEL
ID RSMB_CAEEL Reviewed; 160 AA.
AC P91918;
DT 28-MAR-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1997, sequence version 1.
DT 03-AUG-2022, entry version 132.
DE RecName: Full=Probable small nuclear ribonucleoprotein-associated protein B;
DE Short=snRNP-B;
DE AltName: Full=Sm protein B;
DE Short=Sm-B;
DE Short=SmB;
GN Name=snr-2; ORFNames=W08E3.1;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239 {ECO:0000312|EMBL:CAB07132.1};
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
CC -!- FUNCTION: Plays a role in pre-mRNA splicing as a core component of the
CC spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins
CC (snRNPs), the building blocks of the spliceosome.
CC {ECO:0000250|UniProtKB:P14678}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:P14678}.
CC Cytoplasm, cytosol {ECO:0000250|UniProtKB:P14678}.
CC -!- SIMILARITY: Belongs to the snRNP SmB/SmN family. {ECO:0000305}.
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DR EMBL; Z92773; CAB07132.1; -; Genomic_DNA.
DR PIR; T26289; T26289.
DR RefSeq; NP_493348.1; NM_060947.4.
DR AlphaFoldDB; P91918; -.
DR SMR; P91918; -.
DR BioGRID; 38599; 16.
DR IntAct; P91918; 3.
DR STRING; 6239.W08E3.1; -.
DR EPD; P91918; -.
DR PaxDb; P91918; -.
DR PeptideAtlas; P91918; -.
DR EnsemblMetazoa; W08E3.1.1; W08E3.1.1; WBGene00004915.
DR GeneID; 173204; -.
DR KEGG; cel:CELE_W08E3.1; -.
DR UCSC; W08E3.1; c. elegans.
DR CTD; 173204; -.
DR WormBase; W08E3.1; CE14704; WBGene00004915; snr-2.
DR eggNOG; KOG3168; Eukaryota.
DR GeneTree; ENSGT00940000170258; -.
DR HOGENOM; CLU_076902_1_1_1; -.
DR InParanoid; P91918; -.
DR OMA; DKHMNIL; -.
DR OrthoDB; 1630470at2759; -.
DR PhylomeDB; P91918; -.
DR Reactome; R-CEL-111367; SLBP independent Processing of Histone Pre-mRNAs.
DR Reactome; R-CEL-191859; snRNP Assembly.
DR Reactome; R-CEL-72163; mRNA Splicing - Major Pathway.
DR Reactome; R-CEL-72165; mRNA Splicing - Minor Pathway.
DR Reactome; R-CEL-73856; RNA Polymerase II Transcription Termination.
DR Reactome; R-CEL-77588; SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs.
DR PRO; PR:P91918; -.
DR Proteomes; UP000001940; Chromosome I.
DR Bgee; WBGene00004915; Expressed in embryo and 3 other tissues.
DR GO; GO:0071013; C:catalytic step 2 spliceosome; IBA:GO_Central.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.
DR GO; GO:0005685; C:U1 snRNP; IBA:GO_Central.
DR GO; GO:0005686; C:U2 snRNP; IBA:GO_Central.
DR GO; GO:0071004; C:U2-type prespliceosome; IBA:GO_Central.
DR GO; GO:0005687; C:U4 snRNP; IBA:GO_Central.
DR GO; GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IBA:GO_Central.
DR GO; GO:0005682; C:U5 snRNP; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IBA:GO_Central.
DR InterPro; IPR001163; LSM_dom_euk/arc.
DR InterPro; IPR010920; LSM_dom_sf.
DR Pfam; PF01423; LSM; 1.
DR SMART; SM00651; Sm; 1.
DR SUPFAM; SSF50182; SSF50182; 1.
PE 3: Inferred from homology;
KW Cytoplasm; mRNA processing; mRNA splicing; Nucleus; Reference proteome;
KW Ribonucleoprotein; RNA-binding; Spliceosome.
FT CHAIN 1..160
FT /note="Probable small nuclear ribonucleoprotein-associated
FT protein B"
FT /id="PRO_0000125522"
FT REGION 80..160
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 160 AA; 16742 MW; 8427F8FFA0DAA9A1 CRC64;
MTISKNNKMM AHLNYRMKII LQDGRTFIGF FKAFDKHMNI LLAECEEHRQ IKPKAGKKTD
GEEKRILGLV LVRGEHIVSM TVDGPPPRDD DSVRLAKAGG AGGVGQAKPG GRGMPAMPGM
PGMPPGGAPG GLSGAMRGHG GPGMAAMQPG YGGPPGGRPF