RSMD_BUCAI
ID RSMD_BUCAI Reviewed; 191 AA.
AC P57136;
DT 01-DEC-2000, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2000, sequence version 1.
DT 03-AUG-2022, entry version 98.
DE RecName: Full=Ribosomal RNA small subunit methyltransferase D;
DE EC=2.1.1.171;
DE AltName: Full=16S rRNA m2G966 methyltransferase;
DE AltName: Full=rRNA (guanine-N(2)-)-methyltransferase;
GN Name=rsmD; OrderedLocusNames=BU023;
OS Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon
OS pisum symbiotic bacterium).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Erwiniaceae; Buchnera.
OX NCBI_TaxID=107806;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=APS;
RX PubMed=10993077; DOI=10.1038/35024074;
RA Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H.;
RT "Genome sequence of the endocellular bacterial symbiont of aphids Buchnera
RT sp. APS.";
RL Nature 407:81-86(2000).
CC -!- FUNCTION: Specifically methylates the guanine in position 966 of 16S
CC rRNA in the assembled 30S particle. {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=guanosine(966) in 16S rRNA + S-adenosyl-L-methionine = H(+) +
CC N(2)-methylguanosine(966) in 16S rRNA + S-adenosyl-L-homocysteine;
CC Xref=Rhea:RHEA:23548, Rhea:RHEA-COMP:10211, Rhea:RHEA-COMP:10212,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:57856, ChEBI:CHEBI:59789,
CC ChEBI:CHEBI:74269, ChEBI:CHEBI:74481; EC=2.1.1.171;
CC -!- SIMILARITY: Belongs to the methyltransferase superfamily. RsmD family.
CC {ECO:0000305}.
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DR EMBL; BA000003; BAB12750.1; -; Genomic_DNA.
DR RefSeq; NP_239864.1; NC_002528.1.
DR RefSeq; WP_009873984.1; NC_002528.1.
DR AlphaFoldDB; P57136; -.
DR SMR; P57136; -.
DR STRING; 107806.10038715; -.
DR EnsemblBacteria; BAB12750; BAB12750; BAB12750.
DR KEGG; buc:BU023; -.
DR PATRIC; fig|107806.10.peg.35; -.
DR eggNOG; COG0742; Bacteria.
DR HOGENOM; CLU_075826_2_2_6; -.
DR OMA; FNWLMPY; -.
DR Proteomes; UP000001806; Chromosome.
DR GO; GO:0052913; F:16S rRNA (guanine(966)-N(2))-methyltransferase activity; IEA:UniProtKB-EC.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 3.40.50.150; -; 1.
DR InterPro; IPR002052; DNA_methylase_N6_adenine_CS.
DR InterPro; IPR004398; RNA_MeTrfase_RsmD.
DR InterPro; IPR029063; SAM-dependent_MTases_sf.
DR PIRSF; PIRSF004553; CHP00095; 1.
DR SUPFAM; SSF53335; SSF53335; 1.
DR TIGRFAMs; TIGR00095; TIGR00095; 1.
DR PROSITE; PS00092; N6_MTASE; 1.
PE 3: Inferred from homology;
KW Methyltransferase; Reference proteome; rRNA processing;
KW S-adenosyl-L-methionine; Transferase.
FT CHAIN 1..191
FT /note="Ribosomal RNA small subunit methyltransferase D"
FT /id="PRO_0000216243"
SQ SEQUENCE 191 AA; 22651 MW; 436C5F084F13D420 CRC64;
MNNSFFRKNS KIYIISGNLK GRKISFKNIP NLRPTTNQIR ETLFEWLSKY IKNSRCLDCF
AGSGVLGIEA ISRYAAFSTL LEIEKKTFLT LKKNIKELNI YNVEIIRTNT LHWLKKTRNK
PYDIIFIDPP YHQGLVKKTI NLLENKKWIK KNSFIYIEQE KKQSIIVPKN WTLYKKKITN
QIQCYLYICS T