RSS3_ORYSJ
ID RSS3_ORYSJ Reviewed; 458 AA.
AC K4PW38; Q0ISX6; Q2R581; Q53KT8;
DT 07-JUN-2017, integrated into UniProtKB/Swiss-Prot.
DT 09-JAN-2013, sequence version 1.
DT 03-AUG-2022, entry version 38.
DE RecName: Full=Protein RICE SALT SENSITIVE 3 {ECO:0000303|PubMed:23715469};
GN Name=RSS3 {ECO:0000303|PubMed:23715469};
GN OrderedLocusNames=Os11g0446000 {ECO:0000312|EMBL:BAT13885.1},
GN LOC_Os11g25920 {ECO:0000312|EMBL:ABA93307.2};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, INTERACTION WITH BHLH094; BHLH089;
RP TIFY11A/JAZ9 AND TIFY11C/JAZ11, SUBUNIT, SUBCELLULAR LOCATION, TISSUE
RP SPECIFICITY, AND DISRUPTION PHENOTYPE.
RC STRAIN=cv. Nipponbare;
RX PubMed=23715469; DOI=10.1105/tpc.113.112052;
RA Toda Y., Tanaka M., Ogawa D., Kurata K., Kurotani K., Habu Y., Ando T.,
RA Sugimoto K., Mitsuda N., Katoh E., Abe K., Miyao A., Hirochika H.,
RA Hattori T., Takeda S.;
RT "RICE SALT SENSITIVE3 forms a ternary complex with JAZ and class-C bHLH
RT factors and regulates jasmonate-induced gene expression and root cell
RT elongation.";
RL Plant Cell 25:1709-1725(2013).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG The rice chromosomes 11 and 12 sequencing consortia;
RT "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT genes and recent gene duplications.";
RL BMC Biol. 3:20-20(2005).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
CC -!- FUNCTION: Involved in the repression of jasmonate (JA)-induced genes.
CC Forms a ternary complex with TIFY11A/JAZ9 and BHLH094 to negatively
CC regulate JA-responsive genes. Involved in transcriptional regulation in
CC the root tip. Plays a regulatory role in root cell elongation.
CC Regulates root cell elongation during salt stress.
CC {ECO:0000269|PubMed:23715469}.
CC -!- SUBUNIT: Interacts with BHLH094, BHLH089, TIFY11A/JAZ9 and
CC TIFY11C/JAZ11. Forms a ternary complex with TIFY11A/JAZ9 and BHLH094 in
CC the nucleus. {ECO:0000269|PubMed:23715469}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:23715469}. Cytoplasm
CC {ECO:0000269|PubMed:23715469}.
CC -!- TISSUE SPECIFICITY: Expressed in root tips. Expressed at high levels in
CC the meristematic zone and at low levels in the elongation zone of the
CC root tip. {ECO:0000269|PubMed:23715469}.
CC -!- DISRUPTION PHENOTYPE: Defects in root growth.
CC {ECO:0000269|PubMed:23715469}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAX96247.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=ABA93307.2; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=BAF28189.2; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB753860; BAM62866.1; -; mRNA.
DR EMBL; AC145808; AAX96247.1; ALT_SEQ; Genomic_DNA.
DR EMBL; DP000010; ABA93307.2; ALT_SEQ; Genomic_DNA.
DR EMBL; AP008217; BAF28189.2; ALT_SEQ; Genomic_DNA.
DR EMBL; AP014967; BAT13885.1; -; Genomic_DNA.
DR RefSeq; XP_015615297.1; XM_015759811.1.
DR AlphaFoldDB; K4PW38; -.
DR STRING; 4530.OS11T0446000-01; -.
DR PaxDb; K4PW38; -.
DR PRIDE; K4PW38; -.
DR EnsemblPlants; Os11t0446000-02; Os11t0446000-02; Os11g0446000.
DR GeneID; 4350435; -.
DR Gramene; Os11t0446000-02; Os11t0446000-02; Os11g0446000.
DR KEGG; osa:4350435; -.
DR eggNOG; ENOG502QQDZ; Eukaryota.
DR HOGENOM; CLU_055923_2_0_1; -.
DR OrthoDB; 904632at2759; -.
DR Proteomes; UP000000763; Chromosome 11.
DR Proteomes; UP000059680; Chromosome 11.
DR ExpressionAtlas; K4PW38; baseline and differential.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR InterPro; IPR025610; MYC/MYB_N.
DR InterPro; IPR044170; RSS3-like.
DR PANTHER; PTHR47375; PTHR47375; 1.
DR Pfam; PF14215; bHLH-MYC_N; 2.
PE 1: Evidence at protein level;
KW Cytoplasm; Nucleus; Reference proteome; Stress response; Transcription;
KW Transcription regulation.
FT CHAIN 1..458
FT /note="Protein RICE SALT SENSITIVE 3"
FT /id="PRO_0000440333"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 220..325
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 354..374
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 386..458
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 228..274
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 400..434
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 458 AA; 49187 MW; AB53E7D5584D38CA CRC64;
MVGSGAAGGG GGGGGGGDHA RSKEAAGMMA LHEALRNVCL NSDWTYSVFW TIRPRPRCRG
GNGCKVGDDN GSLMLMWEDG FCRPRVAECL EDIDGEDPVR KAFSKMSIQL YNYGEGLMGK
VASDKCHKWV FKEPSECEPN IANYWQSSFD ALPPEWTDQF ASGIQTIAVI QAGHGLLQLG
SCKIIPEDLH FVLRMRHMFE SLGYQSGFFL SQLFSSSRGT SPSPSSFPLK QQQPPPPQLF
NWPGHAPPQL PPGASPLFPP GPAAFHPSSR PMPPFPGGGK DESHLFHLPP AAAAKQPQHM
DEHHHHQQQP MAAPQQHGGE APEGDLKWPN GLSFFTALTG RTEDAKFLFG GGGGGGADDG
SKTAAAAQDA GHGGAENVEE YLSLESHSNK ARRMESAQST KFKRSFTLPA RMSSSTTSTS
PSVSASTAPA PPQQQQGMEY RGPHEGGVYS DLMETFLE
