RT02_ARATH
ID RT02_ARATH Reviewed; 219 AA.
AC Q9GCB9; Q8LGB5; Q9SS62;
DT 17-JAN-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 125.
DE RecName: Full=Ribosomal protein S2, mitochondrial;
GN Name=RPS2; OrderedLocusNames=At3g03600; ORFNames=T12J13.12;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=12369627; DOI=10.1023/a:1019878212696;
RA Perrotta G., Grienenberger J.-M., Gualberto J.M.;
RT "Plant mitochondrial rps2 genes code for proteins with a C-terminal
RT extension that is processed.";
RL Plant Mol. Biol. 50:523-533(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Mitochondrion.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS2 family.
CC {ECO:0000305}.
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DR EMBL; AF273102; AAG03026.1; -; mRNA.
DR EMBL; AC009327; AAF03472.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE73961.1; -; Genomic_DNA.
DR EMBL; BT003049; AAO23614.1; -; mRNA.
DR EMBL; AY084362; AAM60943.1; -; mRNA.
DR RefSeq; NP_187010.1; NM_111231.4.
DR PDB; 6XYW; EM; 3.86 A; Ba=1-219.
DR PDBsum; 6XYW; -.
DR AlphaFoldDB; Q9GCB9; -.
DR SMR; Q9GCB9; -.
DR BioGRID; 6544; 2.
DR IntAct; Q9GCB9; 1.
DR STRING; 3702.AT3G03600.1; -.
DR PaxDb; Q9GCB9; -.
DR PRIDE; Q9GCB9; -.
DR ProteomicsDB; 228062; -.
DR EnsemblPlants; AT3G03600.1; AT3G03600.1; AT3G03600.
DR GeneID; 821211; -.
DR Gramene; AT3G03600.1; AT3G03600.1; AT3G03600.
DR KEGG; ath:AT3G03600; -.
DR Araport; AT3G03600; -.
DR TAIR; locus:2096394; AT3G03600.
DR eggNOG; KOG0832; Eukaryota.
DR HOGENOM; CLU_095154_0_0_1; -.
DR OMA; HNRAMNL; -.
DR OrthoDB; 573006at2759; -.
DR PhylomeDB; Q9GCB9; -.
DR PRO; PR:Q9GCB9; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9GCB9; baseline and differential.
DR Genevisible; Q9GCB9; AT.
DR GO; GO:0005763; C:mitochondrial small ribosomal subunit; ISS:TAIR.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; TAS:TAIR.
DR CDD; cd01425; RPS2; 1.
DR InterPro; IPR001865; Ribosomal_S2.
DR InterPro; IPR005706; Ribosomal_S2_bac/mit/plastid.
DR InterPro; IPR018130; Ribosomal_S2_CS.
DR InterPro; IPR023591; Ribosomal_S2_flav_dom_sf.
DR PANTHER; PTHR12534; PTHR12534; 1.
DR Pfam; PF00318; Ribosomal_S2; 2.
DR PRINTS; PR00395; RIBOSOMALS2.
DR SUPFAM; SSF52313; SSF52313; 1.
DR PROSITE; PS00962; RIBOSOMAL_S2_1; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Mitochondrion; Reference proteome; Ribonucleoprotein;
KW Ribosomal protein.
FT CHAIN 1..219
FT /note="Ribosomal protein S2, mitochondrial"
FT /id="PRO_0000134338"
FT CONFLICT 98
FT /note="M -> I (in Ref. 5; AAM60943)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 219 AA; 24773 MW; 88E25756233C038A CRC64;
MTIHAAVIQK LLNTGAHLGR RAAEHHFKQY AYGTRNGMTI IDSDKTLICL RSAAHFVANL
AHMRGNIFFV NTNPLFDEII ELTSRRIQGD SYNHNRAMNL WKMGGFLTNS YSPKKFRSRH
KKLCFGPTTM PDCVVVFDSE RKSSVILEAS KLQIPVVAIV DPNVPLEFFE KITYPVPARD
SVKFVYLFCN VITKCFVAEQ MKLGIKEGSN EDLMKDLAA