RT05_CAEBR
ID RT05_CAEBR Reviewed; 415 AA.
AC A8Y3Q1;
DT 13-JUL-2010, integrated into UniProtKB/Swiss-Prot.
DT 27-JUL-2011, sequence version 3.
DT 25-MAY-2022, entry version 69.
DE RecName: Full=Putative 28S ribosomal protein S5, mitochondrial {ECO:0000250|UniProtKB:Q93425};
GN Name=mrps-5; ORFNames=CBG23528;
OS Caenorhabditis briggsae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6238;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF16;
RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA Durbin R.M., Waterston R.H.;
RT "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT genomics.";
RL PLoS Biol. 1:166-192(2003).
CC -!- SUBUNIT: Component of the mitochondrial ribosome small subunit (28S)
CC which comprises a 12S rRNA and about 30 distinct proteins.
CC {ECO:0000250|UniProtKB:P82675}.
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000250|UniProtKB:P82675}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS5 family.
CC {ECO:0000255}.
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DR EMBL; HE601533; CAP39520.3; -; Genomic_DNA.
DR AlphaFoldDB; A8Y3Q1; -.
DR SMR; A8Y3Q1; -.
DR STRING; 6238.CBG23528; -.
DR WormBase; CBG23528; CBP20636; WBGene00041867; Cbr-mrps-5.
DR eggNOG; KOG2646; Eukaryota.
DR HOGENOM; CLU_050434_1_0_1; -.
DR InParanoid; A8Y3Q1; -.
DR OMA; NTVNFFM; -.
DR OrthoDB; 1262134at2759; -.
DR Proteomes; UP000008549; Chromosome V.
DR GO; GO:0005763; C:mitochondrial small ribosomal subunit; ISS:UniProtKB.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IBA:GO_Central.
DR Gene3D; 3.30.230.10; -; 1.
DR InterPro; IPR000851; Ribosomal_S5.
DR InterPro; IPR005324; Ribosomal_S5_C.
DR InterPro; IPR020568; Ribosomal_S5_D2-typ_fold.
DR InterPro; IPR014721; Ribosomal_S5_D2-typ_fold_subgr.
DR InterPro; IPR013810; Ribosomal_S5_N.
DR InterPro; IPR018192; Ribosomal_S5_N_CS.
DR PANTHER; PTHR13718; PTHR13718; 1.
DR Pfam; PF00333; Ribosomal_S5; 1.
DR Pfam; PF03719; Ribosomal_S5_C; 1.
DR SUPFAM; SSF54211; SSF54211; 1.
DR PROSITE; PS00585; RIBOSOMAL_S5; 1.
DR PROSITE; PS50881; S5_DSRBD; 1.
PE 3: Inferred from homology;
KW Mitochondrion; Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..415
FT /note="Putative 28S ribosomal protein S5, mitochondrial"
FT /id="PRO_0000395333"
FT DOMAIN 131..197
FT /note="S5 DRBM"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00268"
FT REGION 1..31
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 396..415
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 415 AA; 47075 MW; 946B22CB9B3439E2 CRC64;
MRRSGPELWK TLTSVSKSGQ KKGRRNTRQP VRPLSRFYRI GSSPMKVEFA GLNAPMRLND
ESLMTIAEQT EDEIRDLMGG TKKILEERDT GKKKRNREKL HPMERGFSGT QLVGQKLGAP
PPVDGVNFDD FETYCLEVKR TSNMTNVFGR VHTMSALVVT GNGRGLAGYA VGKAPIHRTT
TAIINGIGMA SRKIFHVELH EGRTIYQDFY AECRNTRVFA QRRPRGFGLT CHPRLIKICE
AIGIKDIYVK VEGSTKNYLA LTHAFVTGLL NQETHQQLAE RKGLHVVEMS PSRHFLPQIV
ASPISTELKT EETLEALDRL NLDDFYGEGR YPLRKPKALP FFSNLEGHLD ARWRKHPFRN
QESTMIRLIA DNMVPRWTRD ARAAWAEQRN ERMTTGVEPM PLGIGLSHVV PKKDD