RT19_ARATH
ID RT19_ARATH Reviewed; 212 AA.
AC P39697; Q41991; Q94AL0; Q9LVS7;
DT 01-FEB-1995, integrated into UniProtKB/Swiss-Prot.
DT 20-JUN-2002, sequence version 2.
DT 03-AUG-2022, entry version 158.
DE RecName: Full=40S ribosomal protein S19, mitochondrial;
DE Flags: Precursor;
GN Name=RPS19; OrderedLocusNames=At5g47320; ORFNames=MQL5.18;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. C24;
RX PubMed=7862087; DOI=10.1007/bf00294679;
RA Jekabsons W., Schuster W.;
RT "orf250 encodes a second subunit of an ABC-type heme transporter in
RT Oenothera mitochondria.";
RL Mol. Gen. Genet. 246:166-173(1995).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA], AND PROTEIN SEQUENCE OF 30-38.
RC STRAIN=cv. C24;
RX PubMed=8641279; DOI=10.1002/j.1460-2075.1996.tb00567.x;
RA Sanchez H., Fester T., Kloska S., Schroeder W., Schuster W.;
RT "Transfer of rps19 to the nucleus involves the gain of an RNP-binding motif
RT which may functionally replace RPS13 in Arabidopsis mitochondria.";
RL EMBO J. 15:2138-2149(1996).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 131-212.
RC STRAIN=cv. C24; TISSUE=Flower bud;
RX PubMed=8281187; DOI=10.1046/j.1365-313x.1993.04061051.x;
RA Hoefte H., Desprez T., Amselem J., Chiapello H., Rouze P., Caboche M.,
RA Moisan A., Jourjon M.-F., Charpenteau J.-L., Berthomieu P., Guerrier D.,
RA Giraudat J., Quigley F., Thomas F., Yu D.-Y., Mache R., Raynal M.,
RA Cooke R., Grellet F., Delseny M., Parmentier Y., de Marcillac G., Gigot C.,
RA Fleck J., Philipps G., Axelos M., Bardet C., Tremousaygue D., Lescure B.;
RT "An inventory of 1152 expressed sequence tags obtained by partial
RT sequencing of cDNAs from Arabidopsis thaliana.";
RL Plant J. 4:1051-1061(1993).
CC -!- FUNCTION: The RNA-binding domain found in RPS19 may functionally
CC replaces the missing mitochondrial RPS13.
CC -!- SUBCELLULAR LOCATION: Mitochondrion.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS19 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAA97166.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; X78035; CAA54965.1; -; Genomic_DNA.
DR EMBL; X77989; CAA54951.1; -; mRNA.
DR EMBL; AB018117; BAA97166.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED95498.1; -; Genomic_DNA.
DR EMBL; AY045963; AAK76637.1; -; mRNA.
DR EMBL; AY091354; AAM14293.1; -; mRNA.
DR EMBL; Z18203; CAA79136.1; -; mRNA.
DR PIR; S71114; S71114.
DR RefSeq; NP_568681.1; NM_124103.4.
DR PDB; 6XYW; EM; 3.86 A; Br=1-212.
DR PDBsum; 6XYW; -.
DR AlphaFoldDB; P39697; -.
DR SMR; P39697; -.
DR IntAct; P39697; 1.
DR STRING; 3702.AT5G47320.1; -.
DR PaxDb; P39697; -.
DR PRIDE; P39697; -.
DR ProteomicsDB; 228064; -.
DR EnsemblPlants; AT5G47320.1; AT5G47320.1; AT5G47320.
DR GeneID; 834779; -.
DR Gramene; AT5G47320.1; AT5G47320.1; AT5G47320.
DR KEGG; ath:AT5G47320; -.
DR Araport; AT5G47320; -.
DR TAIR; locus:2171539; AT5G47320.
DR eggNOG; KOG0899; Eukaryota.
DR HOGENOM; CLU_1333594_0_0_1; -.
DR InParanoid; P39697; -.
DR OMA; SAMNGQE; -.
DR OrthoDB; 1579773at2759; -.
DR PhylomeDB; P39697; -.
DR PRO; PR:P39697; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; P39697; baseline and differential.
DR Genevisible; P39697; AT.
DR GO; GO:0005763; C:mitochondrial small ribosomal subunit; IDA:TAIR.
DR GO; GO:0003729; F:mRNA binding; IDA:TAIR.
DR GO; GO:0003723; F:RNA binding; ISS:TAIR.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0000028; P:ribosomal small subunit assembly; IBA:GO_Central.
DR GO; GO:0006412; P:translation; NAS:TAIR.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 3.30.860.10; -; 1.
DR HAMAP; MF_00531; Ribosomal_S19; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR020934; Ribosomal_S15/S19_CS.
DR InterPro; IPR002222; Ribosomal_S19.
DR InterPro; IPR005732; Ribosomal_S19_bac-type.
DR InterPro; IPR023575; Ribosomal_S19_S15_SF.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR11880; PTHR11880; 1.
DR Pfam; PF00203; Ribosomal_S19; 1.
DR Pfam; PF00076; RRM_1; 1.
DR PRINTS; PR00975; RIBOSOMALS19.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54570; SSF54570; 1.
DR SUPFAM; SSF54928; SSF54928; 1.
DR TIGRFAMs; TIGR01050; rpsS_bact; 1.
DR PROSITE; PS00323; RIBOSOMAL_S19; 1.
DR PROSITE; PS50102; RRM; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Direct protein sequencing; Mitochondrion; Reference proteome;
KW Ribonucleoprotein; Ribosomal protein; RNA-binding; Transit peptide.
FT TRANSIT 1..29
FT /note="Mitochondrion"
FT /evidence="ECO:0000269|PubMed:8641279"
FT CHAIN 30..212
FT /note="40S ribosomal protein S19, mitochondrial"
FT /id="PRO_0000030631"
FT DOMAIN 31..109
FT /note="RRM"
FT CONFLICT 118
FT /note="D -> V (in Ref. 1; CAA54965 and 2; CAA54951)"
FT /evidence="ECO:0000305"
FT CONFLICT 196
FT /note="F -> L (in Ref. 2; AA sequence)"
FT /evidence="ECO:0000305"
FT CONFLICT 198
FT /note="E -> H (in Ref. 2; AA sequence)"
FT /evidence="ECO:0000305"
FT CONFLICT 200
FT /note="A -> E (in Ref. 2; AA sequence)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 212 AA; 23636 MW; 36966EDFE3EA3F91 CRC64;
MAFCTKLGGH WKQGVNVPVS SMLGSLRYMS TKLYIGGLSP GTDEHSLKDA FSSFNGVTEA
RVMTNKVTGR SRGYGFVNFI SEDSANSAIS AMNGQELNGF NISVNVAKDW PSLPLSLDES
IEEAEKKENK MMSRSVWKDP FVDAFLMKKK NAALNRKIWS RRSTILPEYV DSAVRIYNGK
THVRCKITEG KVGHKFGEFA FTRKVKKHAK AK
