RT31_ORYSJ
ID RT31_ORYSJ Reviewed; 82 AA.
AC P47909; Q0J066; Q651Z6;
DT 01-FEB-1996, integrated into UniProtKB/Swiss-Prot.
DT 27-JUN-2006, sequence version 2.
DT 03-AUG-2022, entry version 93.
DE RecName: Full=30S ribosomal protein S31, mitochondrial;
DE Flags: Precursor;
GN OrderedLocusNames=Os09g0528100, LOC_Os09g35900;
GN ORFNames=OJ1439_F07.33, OsJ_30086 {ECO:0000312|EMBL:EAZ45436.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [6]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 1-59.
RC STRAIN=cv. Nipponbare; TISSUE=Callus;
RX PubMed=7987417; DOI=10.1046/j.1365-313x.1994.6040615.x;
RA Sasaki T., Song J., Koga-Ban Y., Matsui E., Fang F., Higo H., Nagasaki H.,
RA Hori M., Miya M., Murayama-Kayano E., Takiguchi T., Takasuga A., Niki T.,
RA Ishimaru K., Ikeda H., Yamamoto Y., Mukai Y., Ohta I., Miyadera N.,
RA Havukkala I., Minobe Y.;
RT "Toward cataloguing all rice genes: large-scale sequencing of randomly
RT chosen rice cDNAs from a callus cDNA library.";
RL Plant J. 6:615-624(1994).
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bTHX family.
CC {ECO:0000305}.
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DR EMBL; AP005681; BAD46371.1; -; Genomic_DNA.
DR EMBL; AP008215; BAF25649.1; -; Genomic_DNA.
DR EMBL; AP014965; BAT09071.1; -; Genomic_DNA.
DR EMBL; CM000146; EAZ45436.1; -; Genomic_DNA.
DR EMBL; AK059096; BAG86890.1; -; mRNA.
DR EMBL; D15858; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; XP_015610880.1; XM_015755394.1.
DR AlphaFoldDB; P47909; -.
DR SMR; P47909; -.
DR STRING; 4530.OS09T0528100-01; -.
DR PaxDb; P47909; -.
DR PRIDE; P47909; -.
DR EnsemblPlants; Os09t0528100-01; Os09t0528100-01; Os09g0528100.
DR GeneID; 4347646; -.
DR Gramene; Os09t0528100-01; Os09t0528100-01; Os09g0528100.
DR KEGG; osa:4347646; -.
DR eggNOG; ENOG502S834; Eukaryota.
DR HOGENOM; CLU_154125_0_0_1; -.
DR InParanoid; P47909; -.
DR OMA; QPCASRF; -.
DR Proteomes; UP000000763; Chromosome 9.
DR Proteomes; UP000007752; Chromosome 9.
DR Proteomes; UP000059680; Chromosome 9.
DR Genevisible; P47909; OS.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR GO; GO:0009536; C:plastid; IBA:GO_Central.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0032544; P:plastid translation; IBA:GO_Central.
DR InterPro; IPR030826; Ribo_THX.
DR InterPro; IPR044695; RPS31_plant.
DR PANTHER; PTHR34550; PTHR34550; 1.
DR Pfam; PF17067; RPS31; 1.
DR TIGRFAMs; TIGR04560; ribo_THX; 1.
PE 3: Inferred from homology;
KW Mitochondrion; Reference proteome; Ribonucleoprotein; Ribosomal protein;
KW Transit peptide.
FT TRANSIT 1..22
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 23..82
FT /note="30S ribosomal protein S31, mitochondrial"
FT /id="PRO_0000030636"
FT REGION 34..56
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 82 AA; 9246 MW; 853263675094D442 CRC64;
MAMRLAAAAA FVRRLVPARN PVISAEAEAV TCGRGDKKTK RGKRFKGSYG NARPKREKKI
ERIKDRVEVP RSTPWPLPFK LI
