RTN3_XENTR
ID RTN3_XENTR Reviewed; 213 AA.
AC Q28D16; Q6IFY2;
DT 20-MAR-2007, integrated into UniProtKB/Swiss-Prot.
DT 04-APR-2006, sequence version 1.
DT 03-AUG-2022, entry version 67.
DE RecName: Full=Reticulon-3;
GN Name=rtn3; ORFNames=TGas074p07.1;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Gastrula;
RG Sanger Xenopus tropicalis EST/cDNA project;
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Neurula;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (AUG-2003) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP IDENTIFICATION.
RX PubMed=12832288; DOI=10.1096/fj.02-1166hyp;
RA Oertle T., Klinger M., Stuermer C.A.O., Schwab M.E.;
RT "A reticular rhapsody: phylogenic evolution and nomenclature of the
RT RTN/Nogo gene family.";
RL FASEB J. 17:1238-1247(2003).
CC -!- FUNCTION: May be involved in membrane trafficking in the early
CC secretory pathway. {ECO:0000250|UniProtKB:O95197}.
CC -!- SUBUNIT: Homodimer. {ECO:0000250|UniProtKB:O95197}.
CC -!- SUBCELLULAR LOCATION: Endoplasmic reticulum membrane
CC {ECO:0000250|UniProtKB:Q5J6M8}; Multi-pass membrane protein
CC {ECO:0000255}. Golgi apparatus membrane {ECO:0000250|UniProtKB:O95197};
CC Multi-pass membrane protein {ECO:0000255}.
CC -!- SEQUENCE CAUTION:
CC Sequence=DAA02075.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; CR855761; CAJ81633.1; -; mRNA.
DR EMBL; CF242019; -; NOT_ANNOTATED_CDS; mRNA.
DR EMBL; BK004013; DAA02075.1; ALT_INIT; mRNA.
DR RefSeq; NP_001016762.1; NM_001016762.2.
DR AlphaFoldDB; Q28D16; -.
DR SMR; Q28D16; -.
DR STRING; 8364.ENSXETP00000005799; -.
DR PaxDb; Q28D16; -.
DR GeneID; 549516; -.
DR KEGG; xtr:549516; -.
DR CTD; 10313; -.
DR Xenbase; XB-GENE-975126; rtn3.
DR eggNOG; KOG1792; Eukaryota.
DR InParanoid; Q28D16; -.
DR OrthoDB; 423549at2759; -.
DR Proteomes; UP000008143; Chromosome 4.
DR Proteomes; UP000790000; Unplaced.
DR GO; GO:0005783; C:endoplasmic reticulum; ISS:UniProtKB.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005794; C:Golgi apparatus; ISS:UniProtKB.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:1902430; P:negative regulation of amyloid-beta formation; ISS:UniProtKB.
DR GO; GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
DR InterPro; IPR003388; Reticulon.
DR Pfam; PF02453; Reticulon; 1.
DR PROSITE; PS50845; RETICULON; 1.
PE 2: Evidence at transcript level;
KW Endoplasmic reticulum; ER-Golgi transport; Golgi apparatus; Membrane;
KW Reference proteome; Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..213
FT /note="Reticulon-3"
FT /id="PRO_0000280544"
FT TRANSMEM 45..65
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 154..174
FT /note="Helical"
FT /evidence="ECO:0000255"
FT DOMAIN 25..213
FT /note="Reticulon"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00170"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 213 AA; 23284 MW; 3F789DCCA4D737F0 CRC64;
MADTSGPQSS HISSSAGEKG SGCAVQDLLY WRDVKQSGMV FGGTMVLLLS LAAFSIISVI
SYLVLSLLAV TISYRVYKSV LQAVQKTDEG HPFKPLLEKD IALSSDAFQK ALSTSLAHVN
HALKYIVRLF LVEDLVDSLK LALLMWLMTY VGAVFNGITL LILGVLLAFT APIVYEKYKV
QIDHYVSLVH SHVKSITEKI QAKLPGALKK KSE