RTNLU_ARATH
ID RTNLU_ARATH Reviewed; 155 AA.
AC P0C941;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 05-MAY-2009, sequence version 1.
DT 03-AUG-2022, entry version 61.
DE RecName: Full=Reticulon-like protein B23;
DE Short=AtRTNLB23;
GN Name=RTNLB23; OrderedLocusNames=At1g16825; ORFNames=F17F16.24;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14993207; DOI=10.1101/gr.1515604;
RA Castelli V., Aury J.-M., Jaillon O., Wincker P., Clepet C., Menard M.,
RA Cruaud C., Quetier F., Scarpelli C., Schaechter V., Temple G., Caboche M.,
RA Weissenbach J., Salanoubat M.;
RT "Whole genome sequence comparisons and 'full-length' cDNA sequences: a
RT combined approach to evaluate and improve Arabidopsis genome annotation.";
RL Genome Res. 14:406-413(2004).
CC -!- SUBCELLULAR LOCATION: Endoplasmic reticulum membrane {ECO:0000250};
CC Multi-pass membrane protein {ECO:0000250}.
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DR EMBL; AC026237; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002684; AEE29503.1; -; Genomic_DNA.
DR EMBL; BX817960; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; NP_001154345.1; NM_001160873.2.
DR AlphaFoldDB; P0C941; -.
DR PaxDb; P0C941; -.
DR PRIDE; P0C941; -.
DR EnsemblPlants; AT1G16825.1; AT1G16825.1; AT1G16825.
DR GeneID; 7922362; -.
DR Gramene; AT1G16825.1; AT1G16825.1; AT1G16825.
DR KEGG; ath:AT1G16825; -.
DR Araport; AT1G16825; -.
DR TAIR; locus:5019474612; AT1G16825.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_128436_0_0_1; -.
DR OMA; RRECTNT; -.
DR OrthoDB; 1460103at2759; -.
DR PhylomeDB; P0C941; -.
DR PRO; PR:P0C941; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; P0C941; baseline and differential.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR InterPro; IPR003388; Reticulon.
DR InterPro; IPR044177; RTNLB22/23.
DR PANTHER; PTHR47879; PTHR47879; 1.
DR Pfam; PF02453; Reticulon; 1.
PE 2: Evidence at transcript level;
KW Endoplasmic reticulum; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..155
FT /note="Reticulon-like protein B23"
FT /id="PRO_0000371302"
FT TRANSMEM 30..50
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 117..137
FT /note="Helical"
FT /evidence="ECO:0000255"
FT DOMAIN 1..155
FT /note="Reticulon"
FT CONFLICT 18
FT /note="Y -> F (in Ref. 3; BX817960)"
FT /evidence="ECO:0000305"
FT CONFLICT 29
FT /note="L -> F (in Ref. 3; BX817960)"
FT /evidence="ECO:0000305"
FT CONFLICT 118
FT /note="I -> K (in Ref. 3; BX817960)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 155 AA; 16735 MW; 25202D6A381BA681 CRC64;
MGEMGKAIGL LISGTLVYHH CANRNATLLS LISDVLIVLL SSLAILGLLF RHLNVSVPVD
PLEWQISQDT ACNIVARLAN TVGAAESVLR VAATGHDKRL FVKVVICLYF LAALGRIISG
VTIAYAGLCL FCLSMLFRSS IRNSVLNRRN GEILD
