RTS_ORYSJ
ID RTS_ORYSJ Reviewed; 91 AA.
AC Q942X0;
DT 08-JUN-2016, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 03-AUG-2022, entry version 102.
DE RecName: Full=Anther-specific protein RTS {ECO:0000305};
DE AltName: Full=Protein RICE TAPETUM-SPECIFIC {ECO:0000305};
DE Flags: Precursor;
GN Name=RTS {ECO:0000305};
GN OrderedLocusNames=Os01g0929600 {ECO:0000312|EMBL:BAF07198.1},
GN LOC_Os01g70440 {ECO:0000305};
GN ORFNames=OSJNBa0052O12.23 {ECO:0000312|EMBL:BAB90758.1},
GN P0506E04.1 {ECO:0000312|EMBL:BAB67924.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447438; DOI=10.1038/nature01184;
RA Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y.,
RA Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H.,
RA Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.,
RA Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M.,
RA Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T.,
RA Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S.,
RA Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H.,
RA Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y.,
RA Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S.,
RA Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y.,
RA Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S.,
RA Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H.,
RA Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.;
RT "The genome sequence and structure of rice chromosome 1.";
RL Nature 420:312-316(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- FUNCTION: Required for tapetum and pollen development.
CC {ECO:0000250|UniProtKB:Q40629}.
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DR EMBL; AP003272; BAB67924.1; -; Genomic_DNA.
DR EMBL; AP004330; BAB90758.1; -; Genomic_DNA.
DR EMBL; AP008207; BAF07198.1; -; Genomic_DNA.
DR EMBL; AP014957; BAS76024.1; -; Genomic_DNA.
DR EMBL; AK070978; BAG92240.1; -; mRNA.
DR RefSeq; XP_015645306.1; XM_015789820.1.
DR AlphaFoldDB; Q942X0; -.
DR STRING; 4530.OS01T0929600-01; -.
DR PaxDb; Q942X0; -.
DR PRIDE; Q942X0; -.
DR EnsemblPlants; Os01t0929600-01; Os01t0929600-01; Os01g0929600.
DR GeneID; 4326940; -.
DR Gramene; Os01t0929600-01; Os01t0929600-01; Os01g0929600.
DR KEGG; osa:4326940; -.
DR HOGENOM; CLU_2417020_0_0_1; -.
DR InParanoid; Q942X0; -.
DR OMA; HAVFCAT; -.
DR OrthoDB; 1610390at2759; -.
DR Proteomes; UP000000763; Chromosome 1.
DR Proteomes; UP000059680; Chromosome 1.
PE 3: Inferred from homology;
KW Developmental protein; Reference proteome; Signal.
FT SIGNAL 1..21
FT /evidence="ECO:0000255"
FT CHAIN 22..91
FT /note="Anther-specific protein RTS"
FT /id="PRO_5007212742"
SQ SEQUENCE 91 AA; 8401 MW; CD249E3BB41B9EA4 CRC64;
MVRVGAAAAV LVLAAAAAAM AAEPPTDDGA VRVAAGLTKC VSGCGSKVTS CLLGCYGGGG
GAAAAATAMP FCVIGCTSDV LSCATGCSTS L