RU17_XENLA
ID RU17_XENLA Reviewed; 471 AA.
AC P09406;
DT 01-JUL-1989, integrated into UniProtKB/Swiss-Prot.
DT 01-JUL-1989, sequence version 1.
DT 25-MAY-2022, entry version 96.
DE RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa;
DE Short=U1 snRNP 70 kDa;
DE Short=U1-70K;
DE Short=snRNP70;
GN Name=snrnp70; Synonyms=snrp70;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=2468488; DOI=10.1002/j.1460-2075.1988.tb03330.x;
RA Etzerodt M., Vignali R., Scherly D., Mattaj I.W., Ciliberto G.,
RA Philipson L.;
RT "Structure and expression of a Xenopus gene encoding an snRNP protein (U1
RT 70K).";
RL EMBO J. 7:4311-4321(1988).
CC -!- FUNCTION: Component of the spliceosomal U1 snRNP, which is essential
CC for recognition of the pre-mRNA 5' splice-site and the subsequent
CC assembly of the spliceosome. snrnp70 binds to the loop I region of U1-
CC snRNA. {ECO:0000250|UniProtKB:P08621}.
CC -!- SUBUNIT: Component of the U1 snRNP. The U1 snRNP is composed of the U1
CC snRNA and the 7 core Sm proteins snrpb, snrpd1, snrpd2, snrpd3, snrpe,
CC snrpf and snrpg that assemble in a heptameric protein ring on the Sm
CC site of the small nuclear RNA to form the core snRNP, and at least
CC three U1 snRNP-specific proteins snrnp70/U1-70K, snrpa/U1-A and
CC snrpc/U1-C. {ECO:0000250|UniProtKB:P08621}.
CC -!- SUBCELLULAR LOCATION: Nucleus speckle {ECO:0000250|UniProtKB:Q62376}.
CC Nucleus, nucleoplasm {ECO:0000250|UniProtKB:Q62376}.
CC -!- DOMAIN: The RRM domain mediates interaction with U1 RNA.
CC {ECO:0000250|UniProtKB:P08621}.
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DR EMBL; X12430; CAA30972.1; -; mRNA.
DR PIR; S02016; S02016.
DR AlphaFoldDB; P09406; -.
DR SMR; P09406; -.
DR PRIDE; P09406; -.
DR Proteomes; UP000186698; Genome assembly.
DR GO; GO:0016607; C:nuclear speck; ISS:UniProtKB.
DR GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR GO; GO:0005681; C:spliceosomal complex; ISS:UniProtKB.
DR GO; GO:0005685; C:U1 snRNP; ISS:UniProtKB.
DR GO; GO:0003723; F:RNA binding; ISS:UniProtKB.
DR GO; GO:0030619; F:U1 snRNA binding; ISS:UniProtKB.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; ISS:UniProtKB.
DR GO; GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB.
DR CDD; cd12236; RRM_snRNP70; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR034143; snRNP70_RRM.
DR InterPro; IPR022023; U1snRNP70_N.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF12220; U1snRNP70_N; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; SSF54928; 1.
DR PROSITE; PS50102; RRM; 1.
PE 2: Evidence at transcript level;
KW mRNA processing; Nucleus; Reference proteome; Ribonucleoprotein;
KW RNA-binding.
FT CHAIN 1..471
FT /note="U1 small nuclear ribonucleoprotein 70 kDa"
FT /id="PRO_0000081882"
FT DOMAIN 103..184
FT /note="RRM"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT REGION 48..78
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 92..205
FT /note="Required for interaction with U1 RNA"
FT /evidence="ECO:0000250|UniProtKB:P08621"
FT REGION 190..471
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 209..248
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 259..291
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 299..320
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 339..432
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 435..459
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 471 AA; 57204 MW; 959A8BB3064C3FC3 CRC64;
MTQFLPPNLL ALFAPRDPVP YLPPLDKLPH EKHHNQPYCG IAPYIREFED PRDAPPPTRA
ETREERMERK RREKIERRQQ DVENELKIWD PHNDQNAQGD AFKTLFVARV NYDTTESKLR
REFEVYGPIK RIHIVYNKGS EGSGKPRGYA FIEYEHERDM HSAYKHADGK KIDGRRVLVD
VERGRTVKGW RPRRLGGGLG GTRRGGADVN IRHSGRDDTS RYDERDRERE RDRRERSRER
EKEPRERRRS RSRERRRKSR SREKEERKRT REKSKDKDKE KDKDNKDRDR KRRSRSRERK
RERDRDREKK EERVEAEVPE ADDAPQDDAQ IGDLGIDGIE LKQEPEEKSR ERDRERDRDR
EKGEKDRDKD RDRDRDRRRS HRDRDREKDR DRDRDRRRDR DRDRERDKDH KRERDRGDRS
EKREERVPDN GMVMEQAEET SQDMYLDQES MQSGDGYLST ENGYMMEPPM E