RUS3_ARATH
ID RUS3_ARATH Reviewed; 440 AA.
AC Q84JB8; B3H4U4; Q9LMX1;
DT 29-OCT-2014, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 102.
DE RecName: Full=Protein root UVB sensitive 3 {ECO:0000303|PubMed:19515790};
GN Name=RUS3 {ECO:0000303|PubMed:19515790};
GN OrderedLocusNames=At1g13770 {ECO:0000312|Araport:AT1G13770};
GN ORFNames=F21F23.21 {ECO:0000312|EMBL:AAF81304.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000312|EMBL:AAO42280.1};
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RC STRAIN=cv. Columbia;
RX PubMed=19515790; DOI=10.1104/pp.109.139253;
RA Leasure C.D., Tong H., Yuen G., Hou X., Sun X., He Z.H.;
RT "ROOT UV-B SENSITIVE2 acts with ROOT UV-B SENSITIVE1 in a root ultraviolet
RT B-sensing pathway.";
RL Plant Physiol. 150:1902-1915(2009).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000255}; Multi-pass membrane
CC protein {ECO:0000255}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q84JB8-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q84JB8-2; Sequence=VSP_057101;
CC -!- SIMILARITY: Belongs to the RUS1 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF81304.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AC027656; AAF81304.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE29066.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE29067.1; -; Genomic_DNA.
DR EMBL; BT004280; AAO42280.1; -; mRNA.
DR EMBL; BT005607; AAO64027.1; -; mRNA.
DR PIR; C86271; C86271.
DR RefSeq; NP_001117280.1; NM_001123808.2. [Q84JB8-2]
DR RefSeq; NP_172832.3; NM_101245.5. [Q84JB8-1]
DR AlphaFoldDB; Q84JB8; -.
DR BioGRID; 23177; 25.
DR IntAct; Q84JB8; 26.
DR STRING; 3702.AT1G13770.1; -.
DR PaxDb; Q84JB8; -.
DR PRIDE; Q84JB8; -.
DR ProteomicsDB; 226574; -. [Q84JB8-1]
DR DNASU; 837937; -.
DR EnsemblPlants; AT1G13770.1; AT1G13770.1; AT1G13770. [Q84JB8-1]
DR EnsemblPlants; AT1G13770.2; AT1G13770.2; AT1G13770. [Q84JB8-2]
DR GeneID; 837937; -.
DR Gramene; AT1G13770.1; AT1G13770.1; AT1G13770. [Q84JB8-1]
DR Gramene; AT1G13770.2; AT1G13770.2; AT1G13770. [Q84JB8-2]
DR KEGG; ath:AT1G13770; -.
DR Araport; AT1G13770; -.
DR TAIR; locus:2023885; AT1G13770.
DR eggNOG; KOG4249; Eukaryota.
DR InParanoid; Q84JB8; -.
DR OMA; PFQIWDS; -.
DR PhylomeDB; Q84JB8; -.
DR PRO; PR:Q84JB8; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q84JB8; baseline and differential.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR InterPro; IPR006968; RUS_fam.
DR PANTHER; PTHR12770; PTHR12770; 1.
DR Pfam; PF04884; UVB_sens_prot; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..440
FT /note="Protein root UVB sensitive 3"
FT /id="PRO_0000430820"
FT TRANSMEM 109..129
FT /note="Helical; Name=1"
FT /evidence="ECO:0000255"
FT TRANSMEM 154..174
FT /note="Helical; Name=2"
FT /evidence="ECO:0000255"
FT TRANSMEM 232..252
FT /note="Helical; Name=3"
FT /evidence="ECO:0000255"
FT VAR_SEQ 1..87
FT /note="Missing (in isoform 2)"
FT /id="VSP_057101"
SQ SEQUENCE 440 AA; 48613 MW; D20607A3C104FE66 CRC64;
MREEQVSDCG SITLEEWNGS SSTKLFKTAT ITASSSLSIQ RSANRFNHVW RRVLQAFVPE
GFPGSVTPDY VGFQLWDTLQ GLSTYTKMML STQALLSAIG VGEKSATVIG ATFQWFLRDF
TGMLGGILFT FYQGSNLDSN AKMWRLVADL MNDIGMLMDL LSPLFPSAFI VVVCLGSLSR
SFTGVASGAT RAALTQHFAL QDNAADISAK EGSQETMATM MGMSLGMLLA RFTSGNPMAI
WLSFLSLTVF HMYANYRAVR CLVLNSLNFE RSSILLTHFI QTGQVLSPEQ VSSMEGVLPL
WATSLRSTNS KPLHKRVQLG VRVSSLPRLD MLQLLNGVGA SSYKNAKYLL AHIKGNVSVI
LHKDSKPADV LKSYIHAIVL ANLMEKSTSF YSEGEAWIDK HYDELLHKLR SGGWKTERLL
SPSITWRANW ISHTSAAKFD
