RUXE_CHICK
ID RUXE_CHICK Reviewed; 92 AA.
AC P62303; P08578; Q15498;
DT 01-AUG-1988, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 111.
DE RecName: Full=Small nuclear ribonucleoprotein E;
DE Short=snRNP-E;
DE AltName: Full=Sm protein E;
DE Short=Sm-E;
DE Short=SmE;
GN Name=SNRPE;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC TISSUE=Liver;
RX PubMed=1478669; DOI=10.1016/s0888-7543(05)80109-0;
RA Fautsch M., Thompson M.A., Holicky E.L., Schultz P.J., Hallett J.B.,
RA Wieben E.D.;
RT "Conservation of coding and transcriptional control sequences within the
RT snRNP E protein gene.";
RL Genomics 14:883-890(1992).
CC -!- FUNCTION: Plays a role in pre-mRNA splicing as a core component of the
CC spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins
CC (snRNPs), the building blocks of the spliceosome. Component of both the
CC pre-catalytic spliceosome B complex and activated spliceosome C
CC complexes. Is also a component of the minor U12 spliceosome. As part of
CC the U7 snRNP it is involved in histone 3'-end processing.
CC {ECO:0000250|UniProtKB:P62304}.
CC -!- SUBUNIT: Core component of the spliceosomal U1, U2, U4 and U5 small
CC nuclear ribonucleoproteins (snRNPs), the building blocks of the
CC spliceosome. {ECO:0000250|UniProtKB:P62304}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytosol
CC {ECO:0000250|UniProtKB:P62304}. Nucleus {ECO:0000250|UniProtKB:P62304}.
CC Note=SMN-mediated assembly into core snRNPs occurs in the cytosol
CC before SMN-mediated transport to the nucleus to be included in
CC spliceosomes. {ECO:0000250|UniProtKB:P62304}.
CC -!- SIMILARITY: Belongs to the snRNP Sm proteins family. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; X65702; CAA46624.1; -; mRNA.
DR EMBL; L19064; AAA49073.1; -; mRNA.
DR RefSeq; NP_990581.1; NM_205250.1.
DR AlphaFoldDB; P62303; -.
DR SMR; P62303; -.
DR MINT; P62303; -.
DR STRING; 9031.ENSGALP00000000189; -.
DR PaxDb; P62303; -.
DR Ensembl; ENSGALT00000000190; ENSGALP00000000189; ENSGALG00000000137.
DR GeneID; 396180; -.
DR KEGG; gga:396180; -.
DR CTD; 6635; -.
DR VEuPathDB; HostDB:geneid_396180; -.
DR eggNOG; KOG1774; Eukaryota.
DR GeneTree; ENSGT00390000012818; -.
DR HOGENOM; CLU_125186_1_0_1; -.
DR InParanoid; P62303; -.
DR OMA; TIWLYEQ; -.
DR OrthoDB; 1594132at2759; -.
DR PhylomeDB; P62303; -.
DR TreeFam; TF314419; -.
DR Reactome; R-GGA-111367; SLBP independent Processing of Histone Pre-mRNAs.
DR Reactome; R-GGA-191859; snRNP Assembly.
DR Reactome; R-GGA-72163; mRNA Splicing - Major Pathway.
DR Reactome; R-GGA-72165; mRNA Splicing - Minor Pathway.
DR Reactome; R-GGA-73856; RNA Polymerase II Transcription Termination.
DR Reactome; R-GGA-77588; SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs.
DR PRO; PR:P62303; -.
DR Proteomes; UP000000539; Chromosome 26.
DR Bgee; ENSGALG00000000137; Expressed in ovary and 14 other tissues.
DR GO; GO:0005829; C:cytosol; ISS:UniProtKB.
DR GO; GO:0034709; C:methylosome; ISS:UniProtKB.
DR GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR GO; GO:0034715; C:pICln-Sm protein complex; ISS:UniProtKB.
DR GO; GO:0071011; C:precatalytic spliceosome; IBA:GO_Central.
DR GO; GO:0034719; C:SMN-Sm protein complex; ISS:UniProtKB.
DR GO; GO:0005685; C:U1 snRNP; ISS:UniProtKB.
DR GO; GO:0005686; C:U2 snRNP; IBA:GO_Central.
DR GO; GO:0071007; C:U2-type catalytic step 2 spliceosome; ISS:UniProtKB.
DR GO; GO:0071005; C:U2-type precatalytic spliceosome; ISS:UniProtKB.
DR GO; GO:0005687; C:U4 snRNP; ISS:UniProtKB.
DR GO; GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:UniProtKB.
DR GO; GO:0005682; C:U5 snRNP; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; ISS:UniProtKB.
DR GO; GO:0000387; P:spliceosomal snRNP assembly; ISS:UniProtKB.
DR CDD; cd01718; Sm_E; 1.
DR InterPro; IPR001163; LSM_dom_euk/arc.
DR InterPro; IPR010920; LSM_dom_sf.
DR InterPro; IPR027078; snRNP-E.
DR PANTHER; PTHR11193; PTHR11193; 1.
DR Pfam; PF01423; LSM; 1.
DR SMART; SM00651; Sm; 1.
DR SUPFAM; SSF50182; SSF50182; 1.
PE 3: Inferred from homology;
KW Cytoplasm; mRNA processing; mRNA splicing; Nucleus; Reference proteome;
KW Ribonucleoprotein; RNA-binding; Spliceosome.
FT CHAIN 1..92
FT /note="Small nuclear ribonucleoprotein E"
FT /id="PRO_0000125531"
SQ SEQUENCE 92 AA; 10804 MW; 7D8881CE1F4FA2FD CRC64;
MAYRGQGQKV QKVMVQPINL IFRYLQNRSR IQVWLYEQVN MRIEGCIIGF DEYMNLVLDD
AEEIHSKTKS RKQLGRIMLK GDNITLLQSV SN