RUXX_PYRAB
ID RUXX_PYRAB Reviewed; 75 AA.
AC Q9V0Y8; G8ZJA8;
DT 01-DEC-2000, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 25-MAY-2022, entry version 120.
DE RecName: Full=Putative snRNP Sm-like protein;
GN OrderedLocusNames=PYRAB06500; ORFNames=PAB8160;
OS Pyrococcus abyssi (strain GE5 / Orsay).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Pyrococcus.
OX NCBI_TaxID=272844;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GE5 / Orsay;
RX PubMed=12622808; DOI=10.1046/j.1365-2958.2003.03381.x;
RA Cohen G.N., Barbe V., Flament D., Galperin M., Heilig R., Lecompte O.,
RA Poch O., Prieur D., Querellou J., Ripp R., Thierry J.-C., Van der Oost J.,
RA Weissenbach J., Zivanovic Y., Forterre P.;
RT "An integrated analysis of the genome of the hyperthermophilic archaeon
RT Pyrococcus abyssi.";
RL Mol. Microbiol. 47:1495-1512(2003).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=GE5 / Orsay;
RX PubMed=22057919; DOI=10.1007/s00284-011-0035-x;
RA Gao J., Wang J.;
RT "Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and
RT Pyrococcus furiosus DSM 3638.";
RL Curr. Microbiol. 64:118-129(2012).
CC -!- SIMILARITY: Belongs to the snRNP Sm proteins family. {ECO:0000305}.
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DR EMBL; AJ248285; CAB49563.1; -; Genomic_DNA.
DR EMBL; HE613800; CCE70035.1; -; Genomic_DNA.
DR PIR; B75106; B75106.
DR RefSeq; WP_010867765.1; NC_000868.1.
DR PDB; 1H64; X-ray; 1.90 A; 1/2/A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/T/U/V/W/X/Y/Z=1-75.
DR PDB; 1M8V; X-ray; 2.60 A; A/B/C/D/E/F/G/H/I/J/K/L/M/N=3-75.
DR PDBsum; 1H64; -.
DR PDBsum; 1M8V; -.
DR AlphaFoldDB; Q9V0Y8; -.
DR SMR; Q9V0Y8; -.
DR STRING; 272844.PAB8160; -.
DR EnsemblBacteria; CAB49563; CAB49563; PAB8160.
DR GeneID; 1495548; -.
DR KEGG; pab:PAB8160; -.
DR PATRIC; fig|272844.11.peg.681; -.
DR eggNOG; arCOG00998; Archaea.
DR HOGENOM; CLU_076902_11_1_2; -.
DR OMA; GYDVHMN; -.
DR OrthoDB; 119206at2157; -.
DR PhylomeDB; Q9V0Y8; -.
DR EvolutionaryTrace; Q9V0Y8; -.
DR Proteomes; UP000000810; Chromosome.
DR Proteomes; UP000009139; Chromosome.
DR CDD; cd01731; archaeal_Sm1; 1.
DR HAMAP; MF_00257; Lsm_RuxX; 1.
DR InterPro; IPR044641; Lsm7/SmG-like.
DR InterPro; IPR001163; LSM_dom_euk/arc.
DR InterPro; IPR010920; LSM_dom_sf.
DR InterPro; IPR022901; snRNP_Sm-like_arc.
DR PANTHER; PTHR10553; PTHR10553; 1.
DR Pfam; PF01423; LSM; 1.
DR SMART; SM00651; Sm; 1.
DR SUPFAM; SSF50182; SSF50182; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Ribonucleoprotein.
FT CHAIN 1..75
FT /note="Putative snRNP Sm-like protein"
FT /id="PRO_0000125596"
FT HELIX 5..10
FT /evidence="ECO:0007829|PDB:1H64"
FT TURN 11..14
FT /evidence="ECO:0007829|PDB:1H64"
FT STRAND 15..21
FT /evidence="ECO:0007829|PDB:1H64"
FT STRAND 24..34
FT /evidence="ECO:0007829|PDB:1H64"
FT STRAND 40..49
FT /evidence="ECO:0007829|PDB:1H64"
FT STRAND 52..62
FT /evidence="ECO:0007829|PDB:1H64"
FT HELIX 64..66
FT /evidence="ECO:0007829|PDB:1H64"
FT STRAND 67..72
FT /evidence="ECO:0007829|PDB:1H64"
SQ SEQUENCE 75 AA; 8489 MW; CB08295C82D03F1E CRC64;
MAERPLDVIH RSLDKDVLVI LKKGFEFRGR LIGYDIHLNV VLADAEMIQD GEVVKRYGKI
VIRGDNVLAI SPTEE