RVE3_ARATH
ID RVE3_ARATH Reviewed; 287 AA.
AC Q6R0H0; O23701; Q9LMM9;
DT 31-MAY-2011, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 25-MAY-2022, entry version 135.
DE RecName: Full=Protein REVEILLE 3;
DE AltName: Full=Myb transcription factor LHY-CCA1-like3;
DE AltName: Full=Myb-related protein ASG4;
DE AltName: Full=Protein ALTERED SEED GERMINATION 4;
DE AltName: Full=Transcription factor ASG4;
GN Name=RVE3; Synonyms=ASG4, LCL3; OrderedLocusNames=At1g01520;
GN ORFNames=F22L4.18;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND GENE FAMILY.
RX PubMed=16463103; DOI=10.1007/s11103-005-2910-y;
RA Chen Y., Yang X., He K., Liu M., Li J., Gao Z., Lin Z., Zhang Y., Wang X.,
RA Qiu X., Shen Y., Zhang L., Deng X., Luo J., Deng X.-W., Chen Z., Gu H.,
RA Qu L.-J.;
RT "The MYB transcription factor superfamily of Arabidopsis: expression
RT analysis and phylogenetic comparison with the rice MYB family.";
RL Plant Mol. Biol. 60:107-124(2006).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Columbia;
RA Schmied K.C., Merkle T.;
RT "A small family of LHY-CCA1-like (LCL) MYB1R transcription factors:
RT potential co-regulators of the circadian oscillator.";
RL Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9666060; DOI=10.1016/s0378-1119(98)00286-8;
RA Terryn N., Gielen J., De Keyser A., Van Den Daele H., Ardiles W., Neyt P.,
RA De Clercq R., Coppieters J., Dehais P., Villarroel R., Rouze P.,
RA van Montagu M.;
RT "Sequence analysis of a 40-kb Arabidopsis thaliana genomic region located
RT at the top of chromosome 1.";
RL Gene 215:11-17(1998).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Bautista V.R., Kim C.J., Chen H., Quinitio C., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (NOV-2006) to the EMBL/GenBank/DDBJ databases.
RN [7]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=19805390; DOI=10.1073/pnas.0813035106;
RA Rawat R., Schwartz J., Jones M.A., Sairanen I., Cheng Y., Andersson C.R.,
RA Zhao Y., Ljung K., Harmer S.L.;
RT "REVEILLE1, a Myb-like transcription factor, integrates the circadian clock
RT and auxin pathways.";
RL Proc. Natl. Acad. Sci. U.S.A. 106:16883-16888(2009).
CC -!- FUNCTION: Probable transcription factor. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00625}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF81310.1; Type=Erroneous gene model prediction; Note=The predicted gene At1g01510 has been split into 3 genes: At1g01500, At1g01510 and At1g01520.; Evidence={ECO:0000305};
CC Sequence=CAA73305.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AY519508; AAS09978.1; -; mRNA.
DR EMBL; AJ937211; CAI77452.1; -; mRNA.
DR EMBL; Y12776; CAA73305.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AC061957; AAF81310.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE27299.1; -; Genomic_DNA.
DR EMBL; BT029347; ABK32161.1; -; mRNA.
DR RefSeq; NP_171659.1; NM_100034.2.
DR AlphaFoldDB; Q6R0H0; -.
DR SMR; Q6R0H0; -.
DR BioGRID; 24572; 2.
DR IntAct; Q6R0H0; 1.
DR STRING; 3702.AT1G01520.1; -.
DR PaxDb; Q6R0H0; -.
DR EnsemblPlants; AT1G01520.1; AT1G01520.1; AT1G01520.
DR GeneID; 839337; -.
DR Gramene; AT1G01520.1; AT1G01520.1; AT1G01520.
DR KEGG; ath:AT1G01520; -.
DR Araport; AT1G01520; -.
DR TAIR; locus:2025411; AT1G01520.
DR eggNOG; KOG0724; Eukaryota.
DR HOGENOM; CLU_052430_0_1_1; -.
DR InParanoid; Q6R0H0; -.
DR OrthoDB; 1109519at2759; -.
DR PhylomeDB; Q6R0H0; -.
DR PRO; PR:Q6R0H0; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q6R0H0; baseline and differential.
DR Genevisible; Q6R0H0; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR CDD; cd00167; SANT; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017930; Myb_dom.
DR InterPro; IPR006447; Myb_dom_plants.
DR InterPro; IPR001005; SANT/Myb.
DR InterPro; IPR017884; SANT_dom.
DR Pfam; PF00249; Myb_DNA-binding; 1.
DR SMART; SM00717; SANT; 1.
DR SUPFAM; SSF46689; SSF46689; 1.
DR TIGRFAMs; TIGR01557; myb_SHAQKYF; 1.
DR PROSITE; PS51294; HTH_MYB; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..287
FT /note="Protein REVEILLE 3"
FT /id="PRO_0000408479"
FT DOMAIN 56..110
FT /note="HTH myb-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00625"
FT DNA_BIND 83..106
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00625"
FT REGION 111..135
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 287 AA; 32795 MW; 3C300C106DFDF406 CRC64;
MVTVNPSQAH CLPMKMSLPG FNTLPHTATT IPVSIRSNRT MSFFEDPTKK VRKPYTITKS
RENWTEQEHD KFLEALHLFD RDWKKIKAFV GSKTVIQIRS HAQKYFLKVQ KNGTKEHLPP
PRPKRKANHP YPQKAPKFTL SSSNALFQHD YLYNTNSHPV ISTTRKHGLV HCDVSIPSSV
IKEEFGVSEN CCSTSSSRDK QRTRIVTETN DQESCGKPHR VAPNFAEVYN FIGSVFDPKT
TGHVKRLKEM DPINLETVLL LMKNLSVNLT SPEFDEQRKL ISSYNAS
