RXLRS_PHYIT
ID RXLRS_PHYIT Reviewed; 519 AA.
AC D0NQB4;
DT 08-MAY-2019, integrated into UniProtKB/Swiss-Prot.
DT 15-DEC-2009, sequence version 1.
DT 03-AUG-2022, entry version 34.
DE RecName: Full=RxLR effector protein PITG_15278 {ECO:0000303|PubMed:30329083};
DE Flags: Precursor;
GN ORFNames=PITG_15278;
OS Phytophthora infestans (strain T30-4) (Potato late blight agent).
OC Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC Phytophthora.
OX NCBI_TaxID=403677;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=T30-4;
RX PubMed=19741609; DOI=10.1038/nature08358;
RG The Broad Institute Genome Sequencing Platform;
RA Haas B.J., Kamoun S., Zody M.C., Jiang R.H., Handsaker R.E., Cano L.M.,
RA Grabherr M., Kodira C.D., Raffaele S., Torto-Alalibo T., Bozkurt T.O.,
RA Ah-Fong A.M., Alvarado L., Anderson V.L., Armstrong M.R., Avrova A.,
RA Baxter L., Beynon J., Boevink P.C., Bollmann S.R., Bos J.I., Bulone V.,
RA Cai G., Cakir C., Carrington J.C., Chawner M., Conti L., Costanzo S.,
RA Ewan R., Fahlgren N., Fischbach M.A., Fugelstad J., Gilroy E.M., Gnerre S.,
RA Green P.J., Grenville-Briggs L.J., Griffith J., Grunwald N.J., Horn K.,
RA Horner N.R., Hu C.H., Huitema E., Jeong D.H., Jones A.M., Jones J.D.,
RA Jones R.W., Karlsson E.K., Kunjeti S.G., Lamour K., Liu Z., Ma L.,
RA Maclean D., Chibucos M.C., McDonald H., McWalters J., Meijer H.J.,
RA Morgan W., Morris P.F., Munro C.A., O'Neill K., Ospina-Giraldo M.,
RA Pinzon A., Pritchard L., Ramsahoye B., Ren Q., Restrepo S., Roy S.,
RA Sadanandom A., Savidor A., Schornack S., Schwartz D.C., Schumann U.D.,
RA Schwessinger B., Seyer L., Sharpe T., Silvar C., Song J., Studholme D.J.,
RA Sykes S., Thines M., van de Vondervoort P.J., Phuntumart V., Wawra S.,
RA Weide R., Win J., Young C., Zhou S., Fry W., Meyers B.C., van West P.,
RA Ristaino J., Govers F., Birch P.R., Whisson S.C., Judelson H.S.,
RA Nusbaum C.;
RT "Genome sequence and analysis of the Irish potato famine pathogen
RT Phytophthora infestans.";
RL Nature 461:393-398(2009).
RN [2]
RP INDUCTION.
RX PubMed=28228125; DOI=10.1186/s12864-017-3585-x;
RA Ah-Fong A.M., Kim K.S., Judelson H.S.;
RT "RNA-seq of life stages of the oomycete Phytophthora infestans reveals
RT dynamic changes in metabolic, signal transduction, and pathogenesis genes
RT and a major role for calcium signaling in development.";
RL BMC Genomics 18:198-198(2017).
RN [3]
RP INDUCTION, AND DOMAIN.
RX PubMed=29312401; DOI=10.3389/fpls.2017.02155;
RA Yin J., Gu B., Huang G., Tian Y., Quan J., Lindqvist-Kreuze H., Shan W.;
RT "Conserved RXLR effector genes of Phytophthora infestans expressed at the
RT early stage of potato infection are suppressive to host defense.";
RL Front. Plant Sci. 8:2155-2155(2017).
RN [4]
RP FUNCTION, AND SUBCELLULAR LOCATION.
RX PubMed=30329083; DOI=10.1093/jxb/ery360;
RA Wang S., McLellan H., Bukharova T., He Q., Murphy F., Shi J., Sun S.,
RA van Weymers P., Ren Y., Thilliez G., Wang H., Chen X., Engelhardt S.,
RA Vleeshouwers V., Gilroy E.M., Whisson S.C., Hein I., Wang X., Tian Z.,
RA Birch P.R.J., Boevink P.C.;
RT "Phytophthora infestans RXLR effectors act in concert at diverse
RT subcellular locations to enhance host colonization.";
RL J. Exp. Bot. 70:343-356(2019).
CC -!- FUNCTION: Effector that enhances P.infestans colonization of Nicotiana
CC benthamiana leaves. {ECO:0000269|PubMed:30329083}.
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000269|PubMed:30329083}. Host
CC cytoplasm {ECO:0000269|PubMed:30329083}.
CC -!- INDUCTION: Expression is induced during host plant infection.
CC {ECO:0000269|PubMed:28228125, ECO:0000269|PubMed:29312401}.
CC -!- DOMAIN: The RxLR-dEER motif acts to carry the protein into the host
CC cell cytoplasm through binding to cell surface phosphatidylinositol-3-
CC phosphate. {ECO:0000305|PubMed:29312401}.
CC -!- SIMILARITY: Belongs to the RxLR effector family. {ECO:0000305}.
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DR EMBL; DS028152; EEY62846.1; -; Genomic_DNA.
DR RefSeq; XP_002898721.1; XM_002898675.1.
DR AlphaFoldDB; D0NQB4; -.
DR SMR; D0NQB4; -.
DR EnsemblProtists; PITG_15278T0; PITG_15278T0; PITG_15278.
DR GeneID; 9479248; -.
DR KEGG; pif:PITG_15278; -.
DR VEuPathDB; FungiDB:PITG_15278; -.
DR eggNOG; ENOG502RG96; Eukaryota.
DR HOGENOM; CLU_021192_3_2_1; -.
DR InParanoid; D0NQB4; -.
DR OMA; RYYQDHG; -.
DR OrthoDB; 1679788at2759; -.
DR Proteomes; UP000006643; Partially assembled WGS sequence.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
PE 2: Evidence at transcript level;
KW Host cytoplasm; Reference proteome; Secreted; Signal; Virulence.
FT SIGNAL 1..24
FT /evidence="ECO:0000255"
FT CHAIN 25..519
FT /note="RxLR effector protein PITG_15278"
FT /id="PRO_5003013639"
FT MOTIF 49..59
FT /note="RxLR-dEER"
FT /evidence="ECO:0000305|PubMed:29312401"
SQ SEQUENCE 519 AA; 59726 MW; 30BBDFD7B088BD43 CRC64;
MHFIYRVVLV LAAFALFKVD SISAGVTFNE EHLTIPRFTR PVEENLIKRQ LRVMDDNERG
FPSGPSLEKI EAMFQSLTNK ITTKSKPSQR DVPDEKLSQL LGAAKPVNKA VEAAGRLKTL
QTQKWLDEGK STQEVFQLLE LNKFMVPNFK KIEGTVFGLP DFNTWVNYVD DFNAKNPTKK
ESMIPTLRTI YSDEGLTRAL ELAKTYSTTN ALATKLRKEQ IQRWLDDAQT PKYVFEMFMI
DDKVDGLLTN PRFIAWTKYV DDFNLQYPTS RASMEPPIAA HYGDDAVFAM LEAAKKVQLT
ENVASRLQAE QIKRLLNSNR SPEYVFEAFN LHETGDNLLS TPMFKTWFNY LESFNKKNTD
KETLLAPIHR YYHDHGVAKI VAEGMKNPST VELSKQLQIQ RYKRWLHAER PPRDAFNTFI
LEKPGADVII RYNERLDGKL YQVRLNKVSD GLLSSPEFQL WSKYLDDWNT KYPDQKQSMA
KIFQALFTED ALAKMIMAAR NNPSTQKIAS LLENAFAKV