RYBPA_DANRE
ID RYBPA_DANRE Reviewed; 385 AA.
AC Q7SYB3;
DT 21-AUG-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2003, sequence version 1.
DT 03-AUG-2022, entry version 92.
DE RecName: Full=RING1 and YY1-binding protein A;
DE AltName: Full=Death effector domain-associated factor A;
DE Short=DED-associated factor A;
GN Name=rybpa {ECO:0000312|ZFIN:ZDB-GENE-030424-3};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1] {ECO:0000312|EMBL:AAH54937.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=AB {ECO:0000312|EMBL:AAH54937.1};
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (JUL-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: May be implicated in the regulation of the transcription as a
CC repressor of the transcriptional activity of E4TF1.
CC {ECO:0000250|UniProtKB:Q8N488}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q8N488}. Cytoplasm
CC {ECO:0000250|UniProtKB:Q8N488}. Note=Primarily found in the nucleus.
CC {ECO:0000250|UniProtKB:Q8N488}.
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DR EMBL; BC054937; AAH54937.1; -; mRNA.
DR AlphaFoldDB; Q7SYB3; -.
DR SMR; Q7SYB3; -.
DR STRING; 7955.ENSDARP00000055037; -.
DR PaxDb; Q7SYB3; -.
DR ZFIN; ZDB-GENE-030424-3; rybpa.
DR eggNOG; KOG4477; Eukaryota.
DR InParanoid; Q7SYB3; -.
DR PhylomeDB; Q7SYB3; -.
DR PRO; PR:Q7SYB3; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Unplaced.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003677; F:DNA binding; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003712; F:transcription coregulator activity; IBA:GO_Central.
DR GO; GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.
DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:InterPro.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IBA:GO_Central.
DR InterPro; IPR039958; RYBP/YAF2.
DR InterPro; IPR033774; YAF2_RYBP.
DR InterPro; IPR001876; Znf_RanBP2.
DR InterPro; IPR036443; Znf_RanBP2_sf.
DR PANTHER; PTHR12920; PTHR12920; 1.
DR Pfam; PF17219; YAF2_RYBP; 1.
DR Pfam; PF00641; zf-RanBP; 1.
DR SMART; SM00547; ZnF_RBZ; 1.
DR SUPFAM; SSF90209; SSF90209; 1.
DR PROSITE; PS01358; ZF_RANBP2_1; 1.
DR PROSITE; PS50199; ZF_RANBP2_2; 1.
PE 2: Evidence at transcript level;
KW Apoptosis; Cytoplasm; DNA-binding; Metal-binding; Nucleus;
KW Reference proteome; Repressor; Transcription; Transcription regulation;
KW Zinc; Zinc-finger.
FT CHAIN 1..385
FT /note="RING1 and YY1-binding protein A"
FT /id="PRO_0000299078"
FT ZN_FING 19..48
FT /note="RanBP2-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00322"
FT REGION 1..23
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 63..317
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 331..385
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 73..153
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 156..190
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 191..221
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 232..257
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 258..272
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 289..317
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 331..367
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 368..385
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 385 AA; 43295 MW; F401743C6389F7ED CRC64;
MGDKKSPSRP KRQAKPSADN GFWDCSVCTF KNSAEAFKCS ICDVRKGTST RKPRINSQLV
AQQVAQQYAA PPPAKKERRE RTDRDLPDDD HFDMDNSDSD RLSSLHPDSD HPERLGLEGG
QLDRGHSLKE RRQERVLDKP QALDTDRRPE RAGLTPDLLQ QQQPQPQQHP QQPQQPQQHS
QQQPQQHPPQ QHNRIDREHT DRAMLEKLQP LREHMEKDHP HTAGSGMQPA ERMGAEREEL
KKGKIERAMM EKHKERHKSL TPSKKPTPKK MKPKLIQKSP AGESNGMKPG KSVTKNNKSV
ISRPKLKNVD RSSAQQLAIT VGNVTVIITD FKEKTRSSST SSSTVTSSAG SEQQHLSSSS
ESTDKGSSRA STPRRDHSSG HNETL