BENZ_ASPTE
ID BENZ_ASPTE Reviewed; 2406 AA.
AC P9WEU9;
DT 12-AUG-2020, integrated into UniProtKB/Swiss-Prot.
DT 12-AUG-2020, sequence version 1.
DT 25-MAY-2022, entry version 7.
DE RecName: Full=Nonribisomal peptide synthetase benZ {ECO:0000303|PubMed:28604695};
DE Short=NRPS benZ {ECO:0000303|PubMed:28604695};
DE EC=6.3.1.- {ECO:0000305|PubMed:28604695};
DE AltName: Full=Benzomalvin biosynthesis cluster protein Z {ECO:0000303|PubMed:28604695};
GN Name=benZ {ECO:0000303|PubMed:28604695};
OS Aspergillus terreus.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus;
OC Aspergillus subgen. Circumdati.
OX NCBI_TaxID=33178;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, DISRUPTION PHENOTYPE, AND
RP PATHWAY.
RC STRAIN=ATCC 20542 / MF4845;
RX PubMed=28604695; DOI=10.1038/nchembio.2408;
RA Clevenger K.D., Bok J.W., Ye R., Miley G.P., Verdan M.H., Velk T., Chen C.,
RA Yang K., Robey M.T., Gao P., Lamprecht M., Thomas P.M., Islam M.N.,
RA Palmer J.M., Wu C.C., Keller N.P., Kelleher N.L.;
RT "A scalable platform to identify fungal secondary metabolites and their
RT gene clusters.";
RL Nat. Chem. Biol. 13:895-901(2017).
CC -!- FUNCTION: Nonribisomal peptide synthetase; part of the gene cluster
CC that mediates the biosynthesis of benzomalvin A and D
CC (PubMed:28604695). The pathway begins with the loading of amino acid
CC precursors onto the A domains of the non ribosomal peptide synthetases
CC benY and benZ (PubMed:28604695). BenY and the A1 domain of benZ are
CC loaded with anthranilate (Anth), while the A2 domain of benZ is loaded
CC with phenylalanine (Phe) (PubMed:28604695). N-methylation of Phe by the
CC methyltransferase benX may happen before loading of Phe onto benZ,
CC after loading of Phe, or after dipeptide formation (PubMed:28604695).
CC Condensation of Anth with the secondary amine of NmPhe or Phe is
CC catalyzed by the C1 domain of benZ, forming a dipeptide intermediate
CC (PubMed:28604695). This is followed by in trans condensation of the
CC Anth-NmPhe dipeptide with Anth bound to the T domain of benY by the C2
CC domain of benZ to form the linear tripeptide Anth-NmPhe-Anth
CC (PubMed:28604695). Cyclization and release of the tripeptide is then
CC catalyzed by the C-terminal C domain of benY and the resulting 11-
CC member macrocyclic intermediate is expected to spontaneously collapse
CC to form the benzodiazepine core (PubMed:28604695). Benzomalvin A is in
CC conformational equilibrium with its atropisomer, benzomalvin D
CC (PubMed:28604695). {ECO:0000269|PubMed:28604695}.
CC -!- PATHWAY: Secondary metabolite biosynthesis.
CC {ECO:0000269|PubMed:28604695}.
CC -!- DOMAIN: NRP synthetases are composed of discrete domains (adenylation
CC (A), thiolation (T) or peptidyl carrier protein (PCP) and condensation
CC (C) domains) which when grouped together are referred to as a single
CC module. Each module is responsible for the recognition (via the A
CC domain) and incorporation of a single amino acid into the growing
CC peptide product. Thus, an NRP synthetase is generally composed of one
CC or more modules and can terminate in a thioesterase domain (TE) that
CC releases the newly synthesized peptide from the enzyme. Occasionally,
CC epimerase (E) domains (responsible for L- to D-amino acid conversion)
CC are present within the NRP synthetase. BenZ as the following bimodular
CC architecture: A1-T1-C1-A2-T2-C2. {ECO:0000305|PubMed:28604695}.
CC -!- DISRUPTION PHENOTYPE: Leads to complete abolishment of the production
CC of benzomalvins A and D. {ECO:0000269|PubMed:28604695}.
CC -!- SIMILARITY: Belongs to the NRP synthetase family. {ECO:0000305}.
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DR EMBL; KX449366; AQM58287.1; -; Genomic_DNA.
DR AlphaFoldDB; P9WEU9; -.
DR SMR; P9WEU9; -.
DR VEuPathDB; FungiDB:ATEG_09064; -.
DR GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR GO; GO:0031177; F:phosphopantetheine binding; IEA:InterPro.
DR Gene3D; 1.10.1200.10; -; 2.
DR Gene3D; 3.30.300.30; -; 2.
DR Gene3D; 3.30.559.10; -; 2.
DR Gene3D; 3.40.50.12780; -; 2.
DR InterPro; IPR010071; AA_adenyl_domain.
DR InterPro; IPR036736; ACP-like_sf.
DR InterPro; IPR045851; AMP-bd_C_sf.
DR InterPro; IPR000873; AMP-dep_Synth/Lig.
DR InterPro; IPR042099; ANL_N_sf.
DR InterPro; IPR023213; CAT-like_dom_sf.
DR InterPro; IPR001242; Condensatn.
DR InterPro; IPR020806; PKS_PP-bd.
DR InterPro; IPR009081; PP-bd_ACP.
DR InterPro; IPR006162; Ppantetheine_attach_site.
DR Pfam; PF00501; AMP-binding; 2.
DR Pfam; PF00668; Condensation; 2.
DR Pfam; PF00550; PP-binding; 2.
DR SMART; SM00823; PKS_PP; 2.
DR SUPFAM; SSF47336; SSF47336; 2.
DR TIGRFAMs; TIGR01733; AA-adenyl-dom; 1.
DR PROSITE; PS50075; CARRIER; 2.
DR PROSITE; PS00012; PHOSPHOPANTETHEINE; 1.
PE 3: Inferred from homology;
KW Ligase; Phosphopantetheine; Phosphoprotein; Repeat.
FT CHAIN 1..2406
FT /note="Nonribisomal peptide synthetase benZ"
FT /id="PRO_0000450605"
FT DOMAIN 794..871
FT /note="Carrier 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258,
FT ECO:0000305|PubMed:28604695"
FT DOMAIN 1875..1951
FT /note="Carrier 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258,
FT ECO:0000305|PubMed:28604695"
FT REGION 278..685
FT /note="Adenylation 1"
FT /evidence="ECO:0000255, ECO:0000305|PubMed:28604695"
FT REGION 911..1183
FT /note="Condensation 1"
FT /evidence="ECO:0000255, ECO:0000305|PubMed:28604695"
FT REGION 1364..1750
FT /note="Adenylation 2"
FT /evidence="ECO:0000255, ECO:0000305|PubMed:28604695"
FT REGION 2001..2271
FT /note="Condensation 2"
FT /evidence="ECO:0000255, ECO:0000305|PubMed:28604695"
FT REGION 2184..2205
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 831
FT /note="O-(pantetheine 4'-phosphoryl)serine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
FT MOD_RES 1912
FT /note="O-(pantetheine 4'-phosphoryl)serine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
SQ SEQUENCE 2406 AA; 263933 MW; 333D3220B2466018 CRC64;
MTRIGFQQHI TGEDTGICIF PKLSKSKHNT TNATNFHETD IWEIPTPTIE ITLKDQGTDL
NTVILAAWAV TVRAFTECQE VRYWVGHQPE ALADSTLDGL TQLLSVPINP QSSWKTLYGH
NGWTIIQPHR PGHAPCNTGV IFNKPITIDC PTLCGGDDEL DRSPVGCKVG LIVCLSTDRL
QISLGYSDSL LSRTAAGNVL SSVQQAILGG IQAPDQPICN HSLYTDLHLK DAGTPTLPAS
TLSTPPTVPW WRGLSHSLIQ LGDHRDQLAI DGWDGRFTYG ELEDTCSSLA AHLQGLGIGP
GMMIAVCFEK SVWAIVAAIS IHMAGAAFVP LDPALPVDRI HRIIAAAGSK FAVVSSKQKT
RLVEGLSIQP IVLSAQTAAT FPPAHALVPS RVSMEDPAYC LFTSGSSGTP KGCIISQRAF
AGISEHHPAV HLSGQSRALQ FASYSFGISI NEIYCTLSAG GTVCVVSDED CAGLSSLARA
ITRMKVTWAF MTPTMIGSLH PKDVPCLEII ITGGEPLNKD QVLTWAHAVH LYQAFGFTEW
CGTCCISPRV TASTPLGEIG TPVPNARAWL VDPVNPTVLA AVGAVAELCI EGTCLAKGYL
HDPEQTSKAF IARPEWGPDE LPGTNGIYGG KGRLYRTGDL VRYLCDGSIQ YLGRRDSQRK
VRGQRIEIAE VEYHLKECFP QAQRIFAEVI MPREGLSQVL TAFVQLHKPV VRSDDGDEWF
EPIDAELQDQ VMSARKAMLT RIPRYMVPDL FLNLRRAPLT VTGKLDRRRL CTYAHQRSRD
ELLGTVSADQ PRRSPSTKVE TMLVSLVAKA INRPMAMVGL DDNFFHLGGD SIKAMALVGE
ARRLHGLQIT VGEIFTHPTV AKVAAVVQDK DTNQGAEFVV EPFSLLSEAD SRQDVVRAVE
NQCHVDQALI EDIFPCTPLQ EGMFALGRRQ RGRYVGRWVF EFQGMSDTEI ARLTEAWAAV
FKEDAILRTR IITSPSQRLY QVVLREPPKW ETSKILFNRD APNEKPDLSV DFGLPLAKMS
IHRNDTPDCF QLALTMHHSV IDGWCFRKIL DQVEAIYHRH TLPASPPFTT FVNYLRQLPD
HKEYWTSYLS GLNAEVFPAI LPSSYQPCPT AAATDYLDLA DFNPGRFTRS AVLRLAWAIT
QAQYQGNHDI VYGMTVSGRN APVPGILAMI SPTVATMPFR VQLNPTASIE ASLDELVEQT
VRGIPHEQTG LQNLMKMGGE VAAACDFQTL LVIQQIDGTD YSLLGRPAQE TSFSVFCTYT
LTLVCDLNVD PVEFKAWYDP QLVPERQVRR LLRQMKHVVQ AICTSPASTV SDCMTLNPSD
AAEISVWNRP LPTLSDYGVD HLFHQHCAEH PHRLAVDAWD VQFTYGALEE LSTHLSAHLV
SLGVGHGDFV PICNEKSGWT VVAVFAVIQS GAAFILLDPS MPTKRLADSC QQARCSLVLT
TTSSLQRVLE FATRVVLADD PYPAPSEISL APVQAEHVLF AVFTSGSTGV PKAAMADHQS
FLGYSLPIMK RIGFGAGVRW LQFSSYAFDM SVNETLWTIL GGGCLCIPSD RQRLDDLVGA
VTALRPTHAV LTPSLMRSLD PKDLPSLRAL MLGGEPTQST EIAAWSPYMQ LMIGYGPAEC
GVTHLRYLSS SPNDPYSSVG FATGGASWLV VPGNTNKLVP IGAVGELLLE GPFVGPGYVH
DVVKTQEAFI PAPQYVKELR RGPSRVYKTG DLMRYNVDGS LSFVGRIDSQ VKIRGQRLEL
TDVEIHLQDC FPAPVQVVVE LIKPTGSPGA PYLAGFVHAP GDECAGATVS DAPRMPRCPA
FYRPRQDFHK QAAGALARLW SRVPRFMVPS LLVNLAYLPQ TPSGKVDRKY LRNALAEMPE
DELKEFRGGV QQKRGAANET ERKIQEFCAT ALQLPCEDIG LDDNFIQLGG DSISAMYVVA
EARKHGVDLC VAEVLEHPRL SSLASDVASH YDPSKGQPSS TRIADVTPFA LVDGELRAVA
TRELVSRGIV ARESQISDIL PVTESQRGFL EQWTPVFNCY LLSGLVDGRR LRNACHTVVA
SRTILRTAFI KPSETTLQAV LQDIELPFRQ TITAEDLLTY CDSIWQGDSE PGSTLNTAPL
RFILASRSAT EHAFIIRLSH AQYDGLSMPT LIGDLEQAYH GGKVEPLIDF ATYVHERALR
DHAATFDFWR EYLLDSSITP LNLPSRAPSQ PSANRRGSAR ITTGQTIPMP ELPDGFTVAS
LVKAATAWLF AQRGQRDDIV FGQTVTGRSM PVVGVEKMLG PCLNTVPLRV QLQAGWTVLD
LLKHVQQQSS RTFAYDYVDF NDIVRSSTAW PHDSYLPCVI QHQNVAQSST LRLKDVECTP
SGWAYFTPPS GMWILTTPQD SRLQVMVCSS RAVCDVEGAK SWVKDLCATI AAFASQPGEL
LDKIKV