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BEPA_SALTI
ID   BEPA_SALTI              Reviewed;         487 AA.
AC   P66951; Q8XG75;
DT   11-OCT-2004, integrated into UniProtKB/Swiss-Prot.
DT   11-OCT-2004, sequence version 1.
DT   03-AUG-2022, entry version 100.
DE   RecName: Full=Beta-barrel assembly-enhancing protease {ECO:0000255|HAMAP-Rule:MF_00997};
DE            EC=3.4.-.- {ECO:0000255|HAMAP-Rule:MF_00997};
DE   Flags: Precursor;
GN   Name=bepA {ECO:0000255|HAMAP-Rule:MF_00997}; Synonyms=yfgC;
GN   OrderedLocusNames=STY2735, t0363;
OS   Salmonella typhi.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Salmonella.
OX   NCBI_TaxID=90370;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CT18;
RX   PubMed=11677608; DOI=10.1038/35101607;
RA   Parkhill J., Dougan G., James K.D., Thomson N.R., Pickard D., Wain J.,
RA   Churcher C.M., Mungall K.L., Bentley S.D., Holden M.T.G., Sebaihia M.,
RA   Baker S., Basham D., Brooks K., Chillingworth T., Connerton P., Cronin A.,
RA   Davis P., Davies R.M., Dowd L., White N., Farrar J., Feltwell T.,
RA   Hamlin N., Haque A., Hien T.T., Holroyd S., Jagels K., Krogh A.,
RA   Larsen T.S., Leather S., Moule S., O'Gaora P., Parry C., Quail M.A.,
RA   Rutherford K.M., Simmonds M., Skelton J., Stevens K., Whitehead S.,
RA   Barrell B.G.;
RT   "Complete genome sequence of a multiple drug resistant Salmonella enterica
RT   serovar Typhi CT18.";
RL   Nature 413:848-852(2001).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700931 / Ty2;
RX   PubMed=12644504; DOI=10.1128/jb.185.7.2330-2337.2003;
RA   Deng W., Liou S.-R., Plunkett G. III, Mayhew G.F., Rose D.J., Burland V.,
RA   Kodoyianni V., Schwartz D.C., Blattner F.R.;
RT   "Comparative genomics of Salmonella enterica serovar Typhi strains Ty2 and
RT   CT18.";
RL   J. Bacteriol. 185:2330-2337(2003).
CC   -!- FUNCTION: Functions as both a chaperone and a metalloprotease.
CC       Maintains the integrity of the outer membrane by promoting either the
CC       assembly or the elimination of outer membrane proteins, depending on
CC       their folding state. {ECO:0000255|HAMAP-Rule:MF_00997}.
CC   -!- COFACTOR:
CC       Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC         Evidence={ECO:0000255|HAMAP-Rule:MF_00997};
CC       Note=Binds 1 zinc ion per subunit. {ECO:0000255|HAMAP-Rule:MF_00997};
CC   -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000255|HAMAP-Rule:MF_00997}.
CC   -!- SIMILARITY: Belongs to the peptidase M48 family. BepA subfamily.
CC       {ECO:0000255|HAMAP-Rule:MF_00997}.
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DR   EMBL; AL513382; CAD02696.1; -; Genomic_DNA.
DR   EMBL; AE014613; AAO68082.1; -; Genomic_DNA.
DR   RefSeq; NP_457029.1; NC_003198.1.
DR   RefSeq; WP_000489630.1; NZ_WSUR01000007.1.
DR   AlphaFoldDB; P66951; -.
DR   SMR; P66951; -.
DR   STRING; 220341.16503712; -.
DR   MEROPS; M48.023; -.
DR   EnsemblBacteria; AAO68082; AAO68082; t0363.
DR   KEGG; stt:t0363; -.
DR   KEGG; sty:STY2735; -.
DR   PATRIC; fig|220341.7.peg.2773; -.
DR   eggNOG; COG4783; Bacteria.
DR   HOGENOM; CLU_030556_0_1_6; -.
DR   OMA; HLSQRHF; -.
DR   Proteomes; UP000000541; Chromosome.
DR   Proteomes; UP000002670; Chromosome.
DR   GO; GO:0016020; C:membrane; IEA:InterPro.
DR   GO; GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
DR   GO; GO:0004222; F:metalloendopeptidase activity; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0061077; P:chaperone-mediated protein folding; IEA:InterPro.
DR   GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR   Gene3D; 1.25.40.10; -; 1.
DR   HAMAP; MF_00997; Protease_BepA; 1.
DR   InterPro; IPR001915; Peptidase_M48.
DR   InterPro; IPR030873; Protease_BepA.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   Pfam; PF01435; Peptidase_M48; 1.
DR   SUPFAM; SSF48452; SSF48452; 1.
PE   3: Inferred from homology;
KW   Hydrolase; Metal-binding; Metalloprotease; Periplasm; Protease; Repeat;
KW   Signal; TPR repeat; Zinc.
FT   SIGNAL          1..27
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_00997"
FT   CHAIN           28..487
FT                   /note="Beta-barrel assembly-enhancing protease"
FT                   /id="PRO_0000035699"
FT   REPEAT          309..342
FT                   /note="TPR 1"
FT   REPEAT          427..460
FT                   /note="TPR 2"
FT   ACT_SITE        137
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_00997"
FT   ACT_SITE        205
FT                   /note="Proton donor"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_00997"
FT   BINDING         136
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_00997"
FT   BINDING         140
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_00997"
FT   BINDING         201
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_00997"
SQ   SEQUENCE   487 AA;  53741 MW;  593FCFCC8DBC0CCE CRC64;
     MFRQLKKNLV ATLIAALALG QVAPAFADPA DTLPDMGTSA GSTLSIGQEM QMGDFYVRQL
     RGSAPLINDP LLVQYINALG MRLVSHADSV KTPFHFFLIN NDEINAFAFF GGNVVLHSAL
     FRYADNESQL ASVMAHEISH VTQRHLARAM EDQKRSAPLT WVGALGSILL AMASPQAGMA
     ALTGTLAGTR QGMISFTQQN EQEADRIGIQ VLQRAGFDPQ AMPSFLEKLL DQARYSTRPP
     EILLTHPLPE SRLADARNRA NQMRPVVVQS SADFYFAKAR ALGMYNSGRN QLTSDLLDQW
     SKGNVRQQHA AQYGRALQAM EASKYDEARK TLQPLLSAEP NNAWYLDLAT DIDLGQKRAN
     DAINRLKNAR DLRVNPVLQL NLANAYLQGG QPKAAETILN RYTFSHKDDG NGWDLLAQAE
     AALNNRDQEL AARAESYALA GRLDQAISLL SSASAQAKLG SQQQARYDAR IDQLRQLQER
     FKPYTKM
 
 
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