S30LB_XENLA
ID S30LB_XENLA Reviewed; 181 AA.
AC Q2TAD4;
DT 13-NOV-2007, integrated into UniProtKB/Swiss-Prot.
DT 24-JAN-2006, sequence version 1.
DT 03-AUG-2022, entry version 46.
DE RecName: Full=Histone deacetylase complex subunit SAP30L-B;
DE AltName: Full=Sin3 corepressor complex subunit SAP30L-B;
DE AltName: Full=Sin3-associated protein p30-like B;
GN Name=sap30l-b;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (DEC-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Functions as transcription repressor, probably via its
CC interaction with histone deacetylase complexes. Involved in the
CC functional recruitment of the class 1 Sin3-histone deacetylase complex
CC (HDAC) to the nucleolus. Binds DNA, apparently without sequence-
CC specificity, and bends bound double-stranded DNA. Binds phosphoinositol
CC phosphates (phosphoinositol 3-phosphate, phosphoinositol 4-phosphate
CC and phosphoinositol 5-phosphate) via the same basic sequence motif that
CC mediates DNA binding and nuclear import.
CC {ECO:0000250|UniProtKB:Q9HAJ7}.
CC -!- SUBUNIT: Interacts with components of the histone deacetylase complex
CC sin3a, hdac1 and hdac2. Binds histones and nucleosomes.
CC {ECO:0000250|UniProtKB:Q9HAJ7}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000250|UniProtKB:Q9HAJ7}.
CC -!- DOMAIN: The zinc-finger domain mediates direct interaction with DNA and
CC phosphoinositol phosphates (phosphoinositol 3-phosphate,
CC phosphoinositol 4-phosphate and phosphoinositol 5-phosphate). In vitro
CC oxydation causes reversible disulfide bond formation between Cys
CC residues in the zinc-finger domain and reversible loss of zinc ion
CC binding. {ECO:0000250|UniProtKB:Q9HAJ7}.
CC -!- SIMILARITY: Belongs to the SAP30 family. {ECO:0000305}.
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DR EMBL; BC110979; AAI10980.1; -; mRNA.
DR RefSeq; NP_001089954.1; NM_001096485.1.
DR AlphaFoldDB; Q2TAD4; -.
DR SMR; Q2TAD4; -.
DR DNASU; 735024; -.
DR GeneID; 735024; -.
DR KEGG; xla:735024; -.
DR CTD; 735024; -.
DR Xenbase; XB-GENE-960207; sap30l.L.
DR OMA; QCARTKR; -.
DR OrthoDB; 1520155at2759; -.
DR Proteomes; UP000186698; Chromosome 3L.
DR Bgee; 735024; Expressed in internal ear and 19 other tissues.
DR GO; GO:0000118; C:histone deacetylase complex; ISS:UniProtKB.
DR GO; GO:0005730; C:nucleolus; ISS:UniProtKB.
DR GO; GO:0003677; F:DNA binding; ISS:UniProtKB.
DR GO; GO:0042393; F:histone binding; ISS:UniProtKB.
DR GO; GO:0044378; F:non-sequence-specific DNA binding, bending; ISS:UniProtKB.
DR GO; GO:0031491; F:nucleosome binding; ISS:UniProtKB.
DR GO; GO:0032266; F:phosphatidylinositol-3-phosphate binding; ISS:UniProtKB.
DR GO; GO:0070273; F:phosphatidylinositol-4-phosphate binding; ISS:UniProtKB.
DR GO; GO:0010314; F:phosphatidylinositol-5-phosphate binding; ISS:UniProtKB.
DR GO; GO:0008270; F:zinc ion binding; ISS:UniProtKB.
DR GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; ISS:UniProtKB.
DR Gene3D; 6.10.160.20; -; 1.
DR InterPro; IPR024145; His_deAcase_SAP30/SAP30L.
DR InterPro; IPR038291; SAP30_C_sf.
DR InterPro; IPR025718; SAP30_Sin3-bd.
DR InterPro; IPR025717; SAP30_zn-finger.
DR PANTHER; PTHR13286; PTHR13286; 1.
DR Pfam; PF13867; SAP30_Sin3_bdg; 1.
DR Pfam; PF13866; zf-SAP30; 1.
PE 2: Evidence at transcript level;
KW Disulfide bond; DNA-binding; Lipid-binding; Metal-binding; Nucleus;
KW Reference proteome; Repressor; Transcription; Transcription regulation;
KW Zinc; Zinc-finger.
FT CHAIN 1..181
FT /note="Histone deacetylase complex subunit SAP30L-B"
FT /id="PRO_0000309504"
FT ZN_FING 26..74
FT /note="Atypical"
FT REGION 82..103
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 85..87
FT /note="Important for DNA and phosphoinositide binding"
FT /evidence="ECO:0000250|UniProtKB:Q9HAJ7"
FT MOTIF 83..88
FT /note="Nuclear localization signal (NLS)"
FT /evidence="ECO:0000250|UniProtKB:Q9HAJ7"
FT COMPBIAS 84..103
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT DISULFID 26..27
FT /note="Redox-active"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00114"
FT DISULFID 35..71
FT /note="Redox-active"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00114"
SQ SEQUENCE 181 AA; 20848 MW; BB82AA9639D36FB2 CRC64;
MNGFSTEEDS RDGPPAQAAP FFGQTCCLID GGERCPRPAG NASFSKRVQK SISQKKLKLD
IDKSVRHLYI CDFHKNYIQS VRNKRKRKTS DDGGDSPEHE TDVPEVDLFQ LQVNTLRRYK
RYYKLQTRPG LNKAQLAETV SRHFRNIPVN EKETLAYFIY MVKSNRSRLD QKSESSKQLD
A