SANS_VARV
ID SANS_VARV Reviewed; 354 AA.
AC P0DST2; P33795;
DT 16-OCT-2019, integrated into UniProtKB/Swiss-Prot.
DT 16-OCT-2019, sequence version 1.
DT 29-SEP-2021, entry version 10.
DE RecName: Full=Surface antigen S;
DE Short=S antigen;
DE Flags: Precursor;
GN ORFNames=B19R, B20R;
OS Variola virus.
OC Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes;
OC Chitovirales; Poxviridae; Chordopoxvirinae; Orthopoxvirus.
OX NCBI_TaxID=10255;
OH NCBI_TaxID=9606; Homo sapiens (Human).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=Bangladesh-1975;
RX PubMed=8264798; DOI=10.1038/366748a0;
RA Massung R.F., Esposito J.J., Liu L.I., Qi J., Utterback T.R., Knight J.C.,
RA Aubin L., Yuran T.E., Parsons J.M., Loparev V.N., Selivanov N.A.,
RA Cavallaro K.F., Kerlavage A.R., Mahy B.W.J., Venter J.C.;
RT "Potential virulence determinants in terminal regions of variola smallpox
RT virus genome.";
RL Nature 366:748-751(1993).
CC -!- FUNCTION: May bind interleukin-1 and/or interleukin-6 and prevent these
CC cytokines reaching their natural receptors. In consequence the
CC inflammatory response would be diminished and virus replication
CC enhanced.
CC -!- SUBCELLULAR LOCATION: Host cell surface. Note=Induced on the surface of
CC vaccinia virus-infected cells.
CC -!- SIMILARITY: Belongs to the interleukin-1 receptor family.
CC {ECO:0000305}.
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DR EMBL; L22579; AAA60926.1; -; Genomic_DNA.
DR PIR; T28616; T28616.
DR RefSeq; NP_042232.1; NC_001611.1.
DR SMR; P0DST2; -.
DR GeneID; 1486551; -.
DR KEGG; vg:1486551; -.
DR Proteomes; UP000119805; Genome.
DR GO; GO:0044228; C:host cell surface; IEA:UniProtKB-SubCell.
DR Gene3D; 2.60.40.10; -; 3.
DR InterPro; IPR007110; Ig-like_dom.
DR InterPro; IPR036179; Ig-like_dom_sf.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR003599; Ig_sub.
DR InterPro; IPR015621; IL-1_rcpt_fam.
DR InterPro; IPR013151; Immunoglobulin.
DR PANTHER; PTHR11890; PTHR11890; 1.
DR Pfam; PF00047; ig; 1.
DR Pfam; PF13895; Ig_2; 1.
DR SMART; SM00409; IG; 3.
DR SUPFAM; SSF48726; SSF48726; 2.
DR PROSITE; PS50835; IG_LIKE; 2.
PE 3: Inferred from homology;
KW Disulfide bond; Early protein; Glycoprotein; Immunoglobulin domain; Repeat;
KW Signal.
FT SIGNAL 1..22
FT /evidence="ECO:0000255"
FT CHAIN 23..354
FT /note="Surface antigen S"
FT /id="PRO_0000448109"
FT DOMAIN 68..150
FT /note="Ig-like C2-type 1"
FT DOMAIN 158..240
FT /note="Ig-like C2-type 2"
FT DOMAIN 249..348
FT /note="Ig-like V-type"
FT CARBOHYD 120
FT /note="N-linked (GlcNAc...) asparagine; by host"
FT /evidence="ECO:0000255"
FT CARBOHYD 124
FT /note="N-linked (GlcNAc...) asparagine; by host"
FT /evidence="ECO:0000255"
FT CARBOHYD 185
FT /note="N-linked (GlcNAc...) asparagine; by host"
FT /evidence="ECO:0000255"
FT CARBOHYD 272
FT /note="N-linked (GlcNAc...) asparagine; by host"
FT /evidence="ECO:0000255"
FT CARBOHYD 324
FT /note="N-linked (GlcNAc...) asparagine; by host"
FT /evidence="ECO:0000255"
FT DISULFID 76..132
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00114"
FT DISULFID 175..224
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00114"
FT DISULFID 275..336
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00114"
SQ SEQUENCE 354 AA; 40868 MW; F9CB76356732E722 CRC64;
MMKMTMKMMV HIYFVSLLLL LFHSYAIDIE NEITDFFNKM KDTLPAKDSK WLNPTCIFGG
TMNNMAAIGE PFSAKCPPIE DSLLSRRYIN KDNVVNWEKI GKTRRPLNRR VKNGDLWIAN
YTSNDSHRMY LCTVITKNGD CIQGIVRSHV RKPSSCIPEI YELGTHDKYG IDLYCGIIYA
KHYNNITWYK DNKEINIDDI KYSQTGKELI IHNPALEDSG RYDCYVHYDD VRIKNDIVVS
RCKILTVIPS QDHRFKLILD SKINVIIGEP ANITCTAVST SLLFDDVLIE WENPSGWLIG
FDFDVYSVLT SRGGITEATL YFKNVTEEYI GNTYKCRGHN YYFEKTLTTT VVLE