SAP49_SCHPO
ID SAP49_SCHPO Reviewed; 335 AA.
AC O14102; Q9HDX0;
DT 06-DEC-2002, integrated into UniProtKB/Swiss-Prot.
DT 06-DEC-2002, sequence version 2.
DT 25-MAY-2022, entry version 129.
DE RecName: Full=Spliceosome-associated protein 49;
GN Name=sap49; ORFNames=SPAC31G5.01, SPAPB1A11.05;
OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC Schizosaccharomyces.
OX NCBI_TaxID=284812;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=972 / ATCC 24843;
RX PubMed=11859360; DOI=10.1038/nature724;
RA Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
RA Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
RA Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.,
RA Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S.,
RA Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S.,
RA Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D.,
RA Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P.,
RA Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K.,
RA O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M.,
RA Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N.,
RA Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A.,
RA Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R.,
RA Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M.,
RA Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A.,
RA Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A.,
RA Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H.,
RA Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S.,
RA Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C.,
RA Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A.,
RA Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M.,
RA del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S.,
RA Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R.,
RA Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G.,
RA Nurse P.;
RT "The genome sequence of Schizosaccharomyces pombe.";
RL Nature 415:871-880(2002).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the SF3B4 family. {ECO:0000305}.
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DR EMBL; CU329670; CAC19730.1; -; Genomic_DNA.
DR RefSeq; NP_594001.2; NM_001019427.2.
DR AlphaFoldDB; O14102; -.
DR SMR; O14102; -.
DR BioGRID; 278888; 13.
DR IntAct; O14102; 4.
DR STRING; 4896.SPAC31G5.01.1; -.
DR MaxQB; O14102; -.
DR PaxDb; O14102; -.
DR EnsemblFungi; SPAC31G5.01.1; SPAC31G5.01.1:pep; SPAC31G5.01.
DR GeneID; 2542426; -.
DR KEGG; spo:SPAC31G5.01; -.
DR PomBase; SPAC31G5.01; sap49.
DR VEuPathDB; FungiDB:SPAC31G5.01; -.
DR eggNOG; KOG0131; Eukaryota.
DR HOGENOM; CLU_012062_21_2_1; -.
DR InParanoid; O14102; -.
DR OMA; HWEQNKE; -.
DR PhylomeDB; O14102; -.
DR PRO; PR:O14102; -.
DR Proteomes; UP000002485; Chromosome I.
DR GO; GO:0005829; C:cytosol; HDA:PomBase.
DR GO; GO:0005634; C:nucleus; HDA:PomBase.
DR GO; GO:1990904; C:ribonucleoprotein complex; IBA:GO_Central.
DR GO; GO:0005686; C:U2 snRNP; IDA:PomBase.
DR GO; GO:0071004; C:U2-type prespliceosome; ISO:PomBase.
DR GO; GO:0003723; F:RNA binding; ISM:PomBase.
DR GO; GO:0045292; P:mRNA cis splicing, via spliceosome; TAS:PomBase.
DR CDD; cd12334; RRM1_SF3B4; 1.
DR CDD; cd12335; RRM2_SF3B4; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR034158; SF3B4_RRM1.
DR InterPro; IPR034159; SF3B4_RRM2.
DR Pfam; PF00076; RRM_1; 2.
DR SMART; SM00360; RRM; 2.
DR SUPFAM; SSF54928; SSF54928; 1.
DR PROSITE; PS50102; RRM; 2.
PE 3: Inferred from homology;
KW Nucleus; Reference proteome; Repeat; RNA-binding.
FT CHAIN 1..335
FT /note="Spliceosome-associated protein 49"
FT /id="PRO_0000081957"
FT DOMAIN 13..84
FT /note="RRM 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT DOMAIN 101..172
FT /note="RRM 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT REGION 204..223
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 335 AA; 35908 MW; 5F05F7CDF7144400 CRC64;
MSIREDRNQD ATIYLGNLDE KVTDSILFEL CLQAGPVVNI HIPRDRVRNS HNGFGFCEFL
HEQDVEYACQ ILNQVKLFGK PIRVNRASQD RGVNTLIGAN LFVGNLDPLV DERVLYDTFS
ALGQLVKAPQ VARDENGRSK GYGFVSYDSF ETADAAIEAM NNQFLMNKPI TVSYAFKREG
KGERHGDIAE RKLAAAAKKN KVAVTPQSTL PPGFSPATPA PTSAANTPAT IAATSIPPVP
NVPLVGATTA VPPLSIPNVL PFTAAQHFPG MPAMPMMNVP MGPGGAPLVP PPPPGMVMAS
PSPAAATIPG APVMPNIPFY QTINAQNGYS QQQRR