SAU39_ORYSJ
ID SAU39_ORYSJ Reviewed; 171 AA.
AC B7F8P5; A0A0P0XR63;
DT 27-MAY-2015, integrated into UniProtKB/Swiss-Prot.
DT 10-FEB-2009, sequence version 1.
DT 03-AUG-2022, entry version 73.
DE RecName: Full=Auxin-responsive protein SAUR36;
DE AltName: Full=Protein SMALL AUXIN UP RNA 36;
GN Name=SAUR39;
GN OrderedLocusNames=Os09g0545300 {ECO:0000312|EMBL:BAH94693.1},
GN LOC_Os09g37330 {ECO:0000305};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RG The rice full-length cDNA consortium;
RT "Oryza sativa full length cDNA.";
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP FUNCTION, SUBCELLULAR LOCATION, TISSUE SPECIFICITY, AND INDUCTION BY AUXIN.
RX PubMed=19700562; DOI=10.1104/pp.109.143875;
RA Kant S., Bi Y.M., Zhu T., Rothstein S.J.;
RT "SAUR39, a small auxin-up RNA gene, acts as a negative regulator of auxin
RT synthesis and transport in rice.";
RL Plant Physiol. 151:691-701(2009).
CC -!- FUNCTION: Involved in the negative regulation of organ growth. May act
CC as a negative regulator of auxin synthesis and transport.
CC {ECO:0000269|PubMed:19700562}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000269|PubMed:19700562}.
CC -!- TISSUE SPECIFICITY: Highly expressed in mature leaves and at lower
CC levels in young leaves, flag leaves and internodes.
CC {ECO:0000269|PubMed:19700562}.
CC -!- INDUCTION: By auxin. {ECO:0000269|PubMed:19700562}.
CC -!- MISCELLANEOUS: Plants over-expressing SAUR39 display reduced shoot and
CC root growth, altered shoot morphology, reduced size of vascular tissue,
CC low yield and decreased basipetal auxin transport.
CC {ECO:0000269|PubMed:19700562}.
CC -!- SIMILARITY: Belongs to the ARG7 family. {ECO:0000305}.
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DR EMBL; AP008215; BAH94693.1; -; Genomic_DNA.
DR EMBL; AP014965; BAT09243.1; -; Genomic_DNA.
DR EMBL; AK241264; BAH00993.1; -; mRNA.
DR RefSeq; XP_015612047.1; XM_015756561.1.
DR AlphaFoldDB; B7F8P5; -.
DR STRING; 4530.OS09T0545300-01; -.
DR PaxDb; B7F8P5; -.
DR PRIDE; B7F8P5; -.
DR EnsemblPlants; Os09t0545300-01; Os09t0545300-01; Os09g0545300.
DR GeneID; 9271092; -.
DR Gramene; Os09t0545300-01; Os09t0545300-01; Os09g0545300.
DR KEGG; osa:9271092; -.
DR eggNOG; ENOG502S4GQ; Eukaryota.
DR HOGENOM; CLU_090137_0_2_1; -.
DR InParanoid; B7F8P5; -.
DR OMA; CKAPSME; -.
DR OrthoDB; 1508386at2759; -.
DR Proteomes; UP000000763; Chromosome 9.
DR Proteomes; UP000059680; Chromosome 9.
DR Genevisible; B7F8P5; OS.
DR GO; GO:0005737; C:cytoplasm; IDA:UniProtKB.
DR GO; GO:0009734; P:auxin-activated signaling pathway; IEA:UniProtKB-KW.
DR GO; GO:0046621; P:negative regulation of organ growth; IMP:UniProtKB.
DR GO; GO:2000012; P:regulation of auxin polar transport; IMP:UniProtKB.
DR InterPro; IPR003676; SAUR_fam.
DR PANTHER; PTHR31175; PTHR31175; 1.
DR Pfam; PF02519; Auxin_inducible; 1.
PE 2: Evidence at transcript level;
KW Auxin signaling pathway; Cytoplasm; Developmental protein;
KW Growth regulation; Reference proteome.
FT CHAIN 1..171
FT /note="Auxin-responsive protein SAUR36"
FT /id="PRO_0000433081"
SQ SEQUENCE 171 AA; 19197 MW; A7F8F33E1EA6B844 CRC64;
MPLQTIHKLK HQYTHNKSSS HQKKHTMINP KRLVHLAKKW QHMAALGRRR LTITGATKEG
NLRCSSAIAD KGHCIIYTAD GERFGVPLTY LSTTVFGELL RLSEDEFGFT GEEKITLPCE
AAVMEYVMCL LRRKPSEEVE QAVVSSVVMP CNYKSSTSMV SVNLSQSLAI F
