SBCC_CLOAB
ID SBCC_CLOAB Reviewed; 1163 AA.
AC Q97FK1;
DT 06-JUN-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2001, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=Nuclease SbcCD subunit C;
GN Name=sbcC; OrderedLocusNames=CA_C2736;
OS Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710
OS / VKM B-1787).
OC Bacteria; Firmicutes; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=272562;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787;
RX PubMed=11466286; DOI=10.1128/jb.183.16.4823-4838.2001;
RA Noelling J., Breton G., Omelchenko M.V., Makarova K.S., Zeng Q., Gibson R.,
RA Lee H.M., Dubois J., Qiu D., Hitti J., Wolf Y.I., Tatusov R.L., Sabathe F.,
RA Doucette-Stamm L.A., Soucaille P., Daly M.J., Bennett G.N., Koonin E.V.,
RA Smith D.R.;
RT "Genome sequence and comparative analysis of the solvent-producing
RT bacterium Clostridium acetobutylicum.";
RL J. Bacteriol. 183:4823-4838(2001).
CC -!- FUNCTION: SbcCD cleaves DNA hairpin structures. These structures can
CC inhibit DNA replication and are intermediates in certain DNA
CC recombination reactions. The complex acts as a 3'->5' double strand
CC exonuclease that can open hairpins. It also has a 5' single-strand
CC endonuclease activity (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Heterodimer of SbcC and SbcD. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the SMC family. SbcC subfamily. {ECO:0000305}.
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DR EMBL; AE001437; AAK80682.1; -; Genomic_DNA.
DR PIR; G97236; G97236.
DR RefSeq; NP_349342.1; NC_003030.1.
DR RefSeq; WP_010966023.1; NC_003030.1.
DR AlphaFoldDB; Q97FK1; -.
DR SMR; Q97FK1; -.
DR STRING; 272562.CA_C2736; -.
DR PRIDE; Q97FK1; -.
DR EnsemblBacteria; AAK80682; AAK80682; CA_C2736.
DR GeneID; 44999224; -.
DR KEGG; cac:CA_C2736; -.
DR PATRIC; fig|272562.8.peg.2925; -.
DR eggNOG; COG0419; Bacteria.
DR HOGENOM; CLU_004785_1_2_9; -.
DR OMA; ISHVQEM; -.
DR OrthoDB; 1143316at2; -.
DR Proteomes; UP000000814; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0140664; F:ATP-dependent DNA damage sensor activity; IEA:InterPro.
DR GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.300; -; 2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038729; Rad50/SbcC_AAA.
DR Pfam; PF13476; AAA_23; 1.
DR SUPFAM; SSF52540; SSF52540; 2.
PE 3: Inferred from homology;
KW ATP-binding; Coiled coil; DNA recombination; DNA replication; Endonuclease;
KW Exonuclease; Hydrolase; Nuclease; Nucleotide-binding; Reference proteome.
FT CHAIN 1..1163
FT /note="Nuclease SbcCD subunit C"
FT /id="PRO_0000105862"
FT COILED 197..415
FT /evidence="ECO:0000255"
FT COILED 446..1003
FT /evidence="ECO:0000255"
FT BINDING 35..42
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
SQ SEQUENCE 1163 AA; 135508 MW; CE5F0BD2215D7A92 CRC64;
MKPIRVRIKG LNSFENEQEI NFEKLTKRGL FGIFGPTGSG KTTILDSITL SLYGEVARKS
SNFMNTNCNS LNVSFEFQIS GKEIKRYLVE REFRRDNKTG SVRSKSAKIV DITGDEVEVL
EEGAKSVNEK CQEIIGLSLD DFTRTVVLPQ GKFSEFLKLE GKERRNMLER LFNLQEYGDE
LSFKLARKIR KEREKENVLV GELKGYENIN EDVLKERREL LKENNDFFNE ASKEYLKAEE
EYNEGKEVWG LQIEIEEKNR VRKDLMEKKD EIDLKEKRAR LGESSSKVKP YIDNYENTLK
QIDILKEQIL SRENTMKAIS LEKEDMEKKL SIAKDNKEKA LPKFMIKHHI ILDAIKEKDL
LDNIKLEKKR LQGKIEKLSL EASNKEELIK QNIKDIDSLT LKIQNLESKI DNLKVPEEYK
NKINEGIFLL RNYDEKLKHK NKLGLDCDKF QVDFEKAKSK KEMLFNKLEE ERSKLDTYTK
KLQDLNKDFP KDDVLLTFQE KLNDSRQKWA KYSEYNESLK ASLRVVENSE QVLRTKKEEM
TKLEDKISKV NIKIESLETE NMAHVLREKL KSGEACPVCG SVHHIKEGFK EVDLKALETL
KSELEGFEKK RKFENEEIVM CEASIKVEEK NIKKLNESIN NLGEEFKEVS LESMEKKFNY
LKEKVNKFNL EKIQLDDNIK DLSERSNKIE VEYQKEKTVE KQCEKRIVDL KSELEEAIKE
FNEVAYTIEN LKAELKIQDF KFEMKEILEK ERVRVEAEGE IKDLRNLLNI RHTEKEQLMD
KCSRLKEELS KNKAELKEKD KIINEKIELI KNKVGVLDNL YELKEKIEGT IKKIEEQYNL
CDKKMNEIED KYRKCSDEII KYHSNLSSLK DRKVNDIDKL NKILMEEKFE NIEKAKENYL
NDKEINLLKS DVEKYKNELS KVNGAVEVLS KKLKNRKLTE EKWIEIQNNR VEKASKAKAL
QERSIKLEEE VKNIEIKLKE LGKLLKTKQE LEHKLSLLDD LEKLFKGKKF VEFVALNQLK
YISIEASKRL KEITGGNYGL EVDDNGKFII RDYKNGGAKR DASTLSGGET FVTSLALALS
LSNQIQLRGS APLELFFLDE GFGTLDSNLL EVVMDSLEKI HSERLSVGII SHLEVIKERM
PVRLIVSPAE AGVGGSKVKL EIS