SBCC_DEIRA
ID SBCC_DEIRA Reviewed; 909 AA.
AC Q9RT44;
DT 05-DEC-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 119.
DE RecName: Full=Nuclease SbcCD subunit C;
GN Name=sbcC; OrderedLocusNames=DR_1922;
OS Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG
OS 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422).
OC Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae;
OC Deinococcus.
OX NCBI_TaxID=243230;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB
RC 9279 / R1 / VKM B-1422;
RX PubMed=10567266; DOI=10.1126/science.286.5444.1571;
RA White O., Eisen J.A., Heidelberg J.F., Hickey E.K., Peterson J.D.,
RA Dodson R.J., Haft D.H., Gwinn M.L., Nelson W.C., Richardson D.L.,
RA Moffat K.S., Qin H., Jiang L., Pamphile W., Crosby M., Shen M.,
RA Vamathevan J.J., Lam P., McDonald L.A., Utterback T.R., Zalewski C.,
RA Makarova K.S., Aravind L., Daly M.J., Minton K.W., Fleischmann R.D.,
RA Ketchum K.A., Nelson K.E., Salzberg S.L., Smith H.O., Venter J.C.,
RA Fraser C.M.;
RT "Genome sequence of the radioresistant bacterium Deinococcus radiodurans
RT R1.";
RL Science 286:1571-1577(1999).
CC -!- FUNCTION: SbcCD cleaves DNA hairpin structures. These structures can
CC inhibit DNA replication and are intermediates in certain DNA
CC recombination reactions. The complex acts as a 3'->5' double strand
CC exonuclease that can open hairpins. It also has a 5' single-strand
CC endonuclease activity (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Heterodimer of SbcC and SbcD. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the SMC family. SbcC subfamily. {ECO:0000305}.
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DR EMBL; AE000513; AAF11474.1; -; Genomic_DNA.
DR PIR; A75337; A75337.
DR RefSeq; NP_295645.1; NC_001263.1.
DR RefSeq; WP_010888557.1; NC_001263.1.
DR STRING; 243230.DR_1922; -.
DR EnsemblBacteria; AAF11474; AAF11474; DR_1922.
DR KEGG; dra:DR_1922; -.
DR PATRIC; fig|243230.17.peg.2140; -.
DR eggNOG; COG0419; Bacteria.
DR HOGENOM; CLU_004785_1_2_0; -.
DR InParanoid; Q9RT44; -.
DR OMA; ISHVQEM; -.
DR OrthoDB; 1143316at2; -.
DR Proteomes; UP000002524; Chromosome I.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0140664; F:ATP-dependent DNA damage sensor activity; IEA:InterPro.
DR GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.300; -; 2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038729; Rad50/SbcC_AAA.
DR Pfam; PF13476; AAA_23; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; Coiled coil; DNA recombination; DNA replication; Endonuclease;
KW Exonuclease; Hydrolase; Nuclease; Nucleotide-binding; Reference proteome.
FT CHAIN 1..909
FT /note="Nuclease SbcCD subunit C"
FT /id="PRO_0000105863"
FT COILED 204..250
FT /evidence="ECO:0000255"
FT COILED 285..453
FT /evidence="ECO:0000255"
FT COILED 484..549
FT /evidence="ECO:0000255"
FT COILED 576..614
FT /evidence="ECO:0000255"
FT COILED 652..751
FT /evidence="ECO:0000255"
FT BINDING 32..39
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
SQ SEQUENCE 909 AA; 100095 MW; D90F765906B0B8D3 CRC64;
MKPLHLTLRG FTAFRQTTDL DFADLELFAL VGPTGSGKSS LLDAMTFALY GETARLGATG
LDALISQGER TLSVALTFEA GGQTYRVTRT RGRKQADNEV RLDRLDPDGE WTGLSSGSQK
DIAQRIEDVV GLDFDTFTRC VMLPQGQFAA LLHGKPRQRQ ELLGELTGMG RVQQMQTFAA
DQVKDFKHQS QSLSSVLASE YAGVSEEAAA AVRAQREQTD ADAERLLQQR EELRTQLQRC
ANXXSLSSRE DTARRLTVQE SRXEGVRQGA ERARRARQVA GVLPLLDAAE RARIAYDRQT
RELAGAESAL QSAQAQAARA DAALTQAQAQ EPRIPELEEQ ANALREAEAD AARLKRAGGS
VQATHANPLP WDEDAFETAR EAAQKLEKLR VERSILESEK AALKAALERY AQEERQQQEE
TAQLERVKAD GLKAKEQLQV AQQREEEARM EAGLASYRSH LHEGEPCPLC LQTVHEVPEG
ESVDLDELRG QVNLLQKLVQ ERREHFTDLR GQLKTRQLWL DEKKSEYHDW NERNKQRELD
ARELERHISG NPQDDLQRLL ASLAGRVRQA GANPAQARRD RLAEIQSIRS RIQEAQAALS
RAQGDLAAAQ ATAQPRSMGG EREADHLAAA DALTKALASL NLTAEAARTA GLPENEIAAL
EEGARKHEAE VAQLRAALAD LDRQLGLEAF DPAHLAQVSR DLTASDAALS TAREQAGRLA
EQERQLRDKL TRKADIETQA AEAGRQLDTW QTLNNALKVN EFQQFMLAEV EAQLLTRAGL
LLFDISDGRY RLSLDKGEYV VQDLWNAGEV RAVKTLSGGE TFLASLSLAI ALSDYLAGNK
VLGALFLDEG FGTLDPQALE AVATALENLR TQGRMVGIVT HVESLSERLP SRLLVSKSMA
GSNVIRVDG