SBCC_RHOCB
ID SBCC_RHOCB Reviewed; 1238 AA.
AC O68032; D5AV82;
DT 05-DEC-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1998, sequence version 1.
DT 03-AUG-2022, entry version 101.
DE RecName: Full=Nuclease SbcCD subunit C;
GN Name=sbcC; OrderedLocusNames=RCAP_rcc02134;
OS Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC Rhodobacteraceae; Rhodobacter.
OX NCBI_TaxID=272942;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=ATCC BAA-309 / NBRC 16581 / SB1003;
RX PubMed=9256491; DOI=10.1073/pnas.94.17.9384;
RA Vlcek C., Paces V., Maltsev N., Paces J., Haselkorn R., Fonstein M.;
RT "Sequence of a 189-kb segment of the chromosome of Rhodobacter capsulatus
RT SB1003.";
RL Proc. Natl. Acad. Sci. U.S.A. 94:9384-9388(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-309 / NBRC 16581 / SB1003;
RX PubMed=20418398; DOI=10.1128/jb.00366-10;
RA Strnad H., Lapidus A., Paces J., Ulbrich P., Vlcek C., Paces V.,
RA Haselkorn R.;
RT "Complete genome sequence of the photosynthetic purple nonsulfur bacterium
RT Rhodobacter capsulatus SB 1003.";
RL J. Bacteriol. 192:3545-3546(2010).
CC -!- FUNCTION: SbcCD cleaves DNA hairpin structures. These structures can
CC inhibit DNA replication and are intermediates in certain DNA
CC recombination reactions. The complex acts as a 3'->5' double strand
CC exonuclease that can open hairpins. It also has a 5' single-strand
CC endonuclease activity (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Heterodimer of SbcC and SbcD. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the SMC family. SbcC subfamily. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AF010496; AAC16118.1; -; Genomic_DNA.
DR EMBL; CP001312; ADE85864.1; -; Genomic_DNA.
DR PIR; T03465; T03465.
DR RefSeq; WP_013067843.1; NC_014034.1.
DR AlphaFoldDB; O68032; -.
DR SMR; O68032; -.
DR STRING; 272942.RCAP_rcc02134; -.
DR EnsemblBacteria; ADE85864; ADE85864; RCAP_rcc02134.
DR GeneID; 31490985; -.
DR KEGG; rcp:RCAP_rcc02134; -.
DR eggNOG; COG0419; Bacteria.
DR HOGENOM; CLU_004785_1_1_5; -.
DR OMA; ISHVQEM; -.
DR OrthoDB; 1143316at2; -.
DR Proteomes; UP000002361; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0140664; F:ATP-dependent DNA damage sensor activity; IEA:InterPro.
DR GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.300; -; 2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038729; Rad50/SbcC_AAA.
DR Pfam; PF13476; AAA_23; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; Coiled coil; DNA recombination; DNA replication; Endonuclease;
KW Exonuclease; Hydrolase; Nuclease; Nucleotide-binding; Reference proteome.
FT CHAIN 1..1238
FT /note="Nuclease SbcCD subunit C"
FT /id="PRO_0000105867"
FT REGION 661..713
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 395..438
FT /evidence="ECO:0000255"
FT COILED 466..487
FT /evidence="ECO:0000255"
FT COILED 521..600
FT /evidence="ECO:0000255"
FT COILED 724..770
FT /evidence="ECO:0000255"
FT COILED 901..943
FT /evidence="ECO:0000255"
FT COILED 1019..1052
FT /evidence="ECO:0000255"
FT BINDING 37..44
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
SQ SEQUENCE 1238 AA; 128048 MW; 2B6BC6C63A859AE1 CRC64;
MRILSISGQN IASLAAPFRI DFTTAPLAGA GLFAITGETG AGKSSILDAM CLALYGDAPR
LSAGARSDKV PDAAGEEISA ADSRAILRRG AATGWAEVRF AGRDGLEYIA RWQARRARDK
VEGKLQTVAR SLARAEDGQV LAAQTQAVSE QVAALTGLSY EEFRRTVLLA QGDFDAFLRA
DTGERATLLE KVTGTGLYRA VSIRVYERTE MARAEHAQLL ARAAEHRLLD DAARAALTEE
IAARTAATAA ATAERAGLSE ALARHRRHAE AVRQVQAAAA ALAGAEALQA EAGPARAQLD
RLERAAPLHL PWQAAAEARA RLDAARSGAE AAAASRSLAA QALATRADAA ARATAAGTET
EEAFKAFGRI WDRAAALDAQ IATAATEAEA ARTRAAETAR AAAGIRRAEA DLAAAETRAQ
QARQAAEARL AELAAQAPLA DDWPQLRRDL ADHRAACAAQ AAAATAAQAA QDRAQALAQE
ARAAAAAEAR DQAADSALAK AAAALQQALA PLEAAHPPAR TADLARIETD LAELTRALRD
GAEAAALGAA AQRAATAAAT EAALARAQES AAKQDLDRAE TQIAALTAPL EQADLALSDA
ARSLRAQLSA GSPCPVCGAL EHPTPAEAGL AHLAERLRAD QAAARGAAQA ARDALTAAQG
ARATAEARGT QAAEDQRRAQ TRAEAARAAW GDTQPRVSAR PLAPALPGTP DPTALAAAQD
RLCALQTAEA AAQAEISALR TRLTEAERDR ERLRRALLAH RGTRERLAVQ QAETAQEAAL
AEARRTEAAA RRDGLALALA PALARAGEDD PAAPGLAERL AATVSAVGAA RTGLQAAQEA
LSALAPQLAA ARRDSETATA QAQSAAQAAR DRDGAWAALR AERAPLLDGQ PTALHRSRFN
DQRLAAQRAQ QAAAADLATA QAALAAAEAR AAETARAASE AATAQRAAEA DLAAALEAAA
MSAAELAALI ALPPGTAERL RADLRGRDDA VTAARSALGA RKTDLQEIED QGNPAEDPEA
LSARLAALEA EAERRAQEIG QLSAELARDA ATRAALAGLA VETEAARAEL EVWEAVNKAI
GARSGDRFAR IAQAITLDVL VEHANRHLAD LNPRYRLRRA AELSLQVEDR DMGDTARATR
SLSGGERFLV SLALALALSQ MGGKGTFAGT LFIDEGFGAL DAGSLDLAID ALETLQSQGR
QVGVISHVEA MQARIATRIA VRKEGGGRSS LRVEGPGV