SBCC_VIBCH
ID SBCC_VIBCH Reviewed; 1013 AA.
AC Q9KM67;
DT 05-DEC-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 99.
DE RecName: Full=Nuclease SbcCD subunit C;
GN Name=sbcC; OrderedLocusNames=VC_A0521;
OS Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=243277;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 39315 / El Tor Inaba N16961;
RX PubMed=10952301; DOI=10.1038/35020000;
RA Heidelberg J.F., Eisen J.A., Nelson W.C., Clayton R.A., Gwinn M.L.,
RA Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Umayam L.A., Gill S.R.,
RA Nelson K.E., Read T.D., Tettelin H., Richardson D.L., Ermolaeva M.D.,
RA Vamathevan J.J., Bass S., Qin H., Dragoi I., Sellers P., McDonald L.A.,
RA Utterback T.R., Fleischmann R.D., Nierman W.C., White O., Salzberg S.L.,
RA Smith H.O., Colwell R.R., Mekalanos J.J., Venter J.C., Fraser C.M.;
RT "DNA sequence of both chromosomes of the cholera pathogen Vibrio
RT cholerae.";
RL Nature 406:477-483(2000).
CC -!- FUNCTION: SbcCD cleaves DNA hairpin structures. These structures can
CC inhibit DNA replication and are intermediates in certain DNA
CC recombination reactions. The complex acts as a 3'->5' double strand
CC exonuclease that can open hairpins. It also has a 5' single-strand
CC endonuclease activity (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Heterodimer of SbcC and SbcD. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the SMC family. SbcC subfamily. {ECO:0000305}.
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DR EMBL; AE003853; AAF96424.1; -; Genomic_DNA.
DR PIR; G82450; G82450.
DR RefSeq; NP_232912.1; NC_002506.1.
DR RefSeq; WP_001247622.1; NZ_LT906615.1.
DR AlphaFoldDB; Q9KM67; -.
DR SMR; Q9KM67; -.
DR STRING; 243277.VC_A0521; -.
DR DNASU; 2612669; -.
DR EnsemblBacteria; AAF96424; AAF96424; VC_A0521.
DR GeneID; 57741925; -.
DR KEGG; vch:VC_A0521; -.
DR PATRIC; fig|243277.26.peg.3147; -.
DR eggNOG; COG0419; Bacteria.
DR HOGENOM; CLU_004785_2_1_6; -.
DR OMA; ISHVQEM; -.
DR BioCyc; VCHO:VCA0521-MON; -.
DR Proteomes; UP000000584; Chromosome 2.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0140664; F:ATP-dependent DNA damage sensor activity; IEA:InterPro.
DR GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.300; -; 2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038729; Rad50/SbcC_AAA.
DR Pfam; PF13476; AAA_23; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; Coiled coil; DNA recombination; DNA replication; Endonuclease;
KW Exonuclease; Hydrolase; Nuclease; Nucleotide-binding; Reference proteome.
FT CHAIN 1..1013
FT /note="Nuclease SbcCD subunit C"
FT /id="PRO_0000105869"
FT COILED 242..262
FT /evidence="ECO:0000255"
FT COILED 281..486
FT /evidence="ECO:0000255"
FT COILED 604..717
FT /evidence="ECO:0000255"
FT COILED 739..838
FT /evidence="ECO:0000255"
FT BINDING 35..42
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
SQ SEQUENCE 1013 AA; 114592 MW; 4050DE39E5CD3885 CRC64;
MRPLKLILQA FGPFAGREEI DFTKLGDAPL FLINGATGAG KSSILDAICY ALYGETTGSE
RTGDQMRCDY AAPESLTEVI FEFELAGARY QITRQPDQEI PKKRGEGMTK KSHSATLVAL
KSDGNELIAN KPNPVAKAVV ELMGLDVKQF RQVMVLPQGK FRELLTANSK EREQIFGQLF
QTQLYSQIER ALFERAAGIR KEKEEFDQQI KGTLSVVGLE SEEQLQTELT ELAPVLTHAQ
SQLKAEQQQW DETKAHYQAA LELEQQFIRK QQLVVEIATH QEQATHIEML RQQRQQAQKA
ARLTAVHQQW HQAQKNLQQA KLKVEQQQTL LQQAKAQQQQ AQQASQQASL ACEEVPKLNE
QRITWQRAEQ KLLAQENVQQ AVAKAERELQ LATQNALNLQ QASEKLEQEL QNQRLEWEQQ
QRQLTRLEVQ KARMNQLVQQ VQAREREQSL LNELQTAQQA LLRFEQQHHH IQTQAEQAKL
TADKLEFAWH TQRAAELALA LTQNEPCPVC GSLEHPNKAQ YSGDVVTKVQ VEQARQQQQD
WVQRQQEAFH AWQQQGFKTE QIAQNLTTLS SELTLQQVAL LNELIEQQQI LHSDIAALQQ
LNPDLLKRQI EEGEQRLAHT KMTLEKQNQN QQQAWQTLAQ LQAELASLRQ EIPPELSDLD
TLRSAIGRVQ NQIEILQKAE HTAREQWVQA QKQFASVQAA YQAAIEAHRE SQRQQEETTS
AWQQGLLHSG FSDESAYLAA RLTDEAIVNI ERQIAQYEER SAMLSGEQQA LSRKLAEKNR
PELEPLLVKV TQAEEKMALA LQAFTQHQSR MDGLQRVAKQ LADLYQKNRA LEAEYQVVGT
LSDIANGKTG AKVSLHRFVL GVLLDDVLLQ ASQRLMKMSR GRYLLKRKEE RAKGNVGSGL
DLMVEDSYSG KWRDVATLSG GESFMAALSL ALGLSDVVQA YSGGIRLDTL FIDEGFGSLD
PESLDLAIQT LIDLQQGGRT IGIISHVTEL KEQIGLRLDV LATRMGSTLR LIT