SC22C_BOVIN
ID SC22C_BOVIN Reviewed; 303 AA.
AC Q2YDJ2;
DT 18-MAR-2008, integrated into UniProtKB/Swiss-Prot.
DT 20-DEC-2005, sequence version 1.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=Vesicle-trafficking protein SEC22c;
DE AltName: Full=SEC22 vesicle-trafficking protein homolog C;
GN Name=SEC22C;
OS Bos taurus (Bovine).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC Bovinae; Bos.
OX NCBI_TaxID=9913;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=Crossbred X Angus; TISSUE=Liver;
RG NIH - Mammalian Gene Collection (MGC) project;
RL Submitted (NOV-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: May be involved in vesicle transport between the ER and the
CC Golgi complex. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Endoplasmic reticulum membrane {ECO:0000250};
CC Multi-pass membrane protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the synaptobrevin family. {ECO:0000305}.
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DR EMBL; BC110195; AAI10196.1; -; mRNA.
DR RefSeq; NP_001040011.1; NM_001046546.2.
DR RefSeq; XP_010815828.1; XM_010817526.2.
DR RefSeq; XP_010815830.1; XM_010817528.2.
DR RefSeq; XP_010815831.1; XM_010817529.2.
DR RefSeq; XP_010815833.1; XM_010817531.2.
DR RefSeq; XP_010815834.1; XM_010817532.1.
DR AlphaFoldDB; Q2YDJ2; -.
DR SMR; Q2YDJ2; -.
DR STRING; 9913.ENSBTAP00000008631; -.
DR PaxDb; Q2YDJ2; -.
DR PRIDE; Q2YDJ2; -.
DR Ensembl; ENSBTAT00000008631; ENSBTAP00000008631; ENSBTAG00000006570.
DR Ensembl; ENSBTAT00000077660; ENSBTAP00000073788; ENSBTAG00000006570.
DR GeneID; 614905; -.
DR KEGG; bta:614905; -.
DR CTD; 9117; -.
DR VEuPathDB; HostDB:ENSBTAG00000006570; -.
DR VGNC; VGNC:34409; SEC22C.
DR eggNOG; KOG0862; Eukaryota.
DR GeneTree; ENSGT00940000159338; -.
DR HOGENOM; CLU_054453_0_0_1; -.
DR InParanoid; Q2YDJ2; -.
DR OMA; CNIYLYG; -.
DR OrthoDB; 903466at2759; -.
DR TreeFam; TF105933; -.
DR Proteomes; UP000009136; Chromosome 22.
DR Bgee; ENSBTAG00000006570; Expressed in oocyte and 108 other tissues.
DR ExpressionAtlas; Q2YDJ2; baseline.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IBA:GO_Central.
DR GO; GO:0006888; P:endoplasmic reticulum to Golgi vesicle-mediated transport; IBA:GO_Central.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR CDD; cd14824; Longin; 1.
DR InterPro; IPR011012; Longin-like_dom_sf.
DR InterPro; IPR010908; Longin_dom.
DR InterPro; IPR043546; Sec22a/c.
DR PANTHER; PTHR46258; PTHR46258; 1.
DR Pfam; PF13774; Longin; 1.
DR SMART; SM01270; Longin; 1.
DR SUPFAM; SSF64356; SSF64356; 1.
DR PROSITE; PS50859; LONGIN; 1.
PE 2: Evidence at transcript level;
KW Endoplasmic reticulum; ER-Golgi transport; Membrane; Protein transport;
KW Reference proteome; Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..303
FT /note="Vesicle-trafficking protein SEC22c"
FT /id="PRO_0000324160"
FT TOPO_DOM 1..183
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 184..204
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 205..223
FT /note="Lumenal"
FT /evidence="ECO:0000255"
FT TRANSMEM 224..244
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 245..248
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 249..269
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 270
FT /note="Lumenal"
FT /evidence="ECO:0000255"
FT TRANSMEM 271..291
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 292..303
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT DOMAIN 8..119
FT /note="Longin"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00231"
SQ SEQUENCE 303 AA; 34133 MW; 7B6E53E6BAFC2FD7 CRC64;
MSLILFACVV RVRDGLPLSA STDFYHSQDF LECRRRLKTL ALRLAQYPGR GSAEGCDFSI
HFSSSRDVAC MAICSLQCPA AMAFCFLETL WWEFTASYDT TCVGLASRPY AFLEFDNVIQ
KVKWHFNYVS STQMDSSLGK IQEELKFQPP VVLTLEDTDV ANGVMNGHTL MHLEPAPSFR
MEPVTALGIL SLILNIMCAA LNLIRGIHLA EHSLQVAHEE IGNILAFLIP FVACIFQCYL
YLFYSPARTM KVVLMLLFIC LGNVYLHGLR NLWQILFHIG VAFLSSHQIL TRQLQDKQSD
CGV