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SC5A6_HUMAN
ID   SC5A6_HUMAN             Reviewed;         635 AA.
AC   Q9Y289; B2RB85; D6W549; Q969Y5;
DT   24-JAN-2001, integrated into UniProtKB/Swiss-Prot.
DT   05-MAY-2009, sequence version 2.
DT   03-AUG-2022, entry version 163.
DE   RecName: Full=Sodium-dependent multivitamin transporter;
DE            Short=Na(+)-dependent multivitamin transporter;
DE   AltName: Full=Solute carrier family 5 member 6;
GN   Name=SLC5A6; Synonyms=SMVT;
OS   Homo sapiens (Human).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
OX   NCBI_TaxID=9606;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA], FUNCTION, TISSUE SPECIFICITY, AND
RP   VARIANT PHE-481.
RC   TISSUE=Intestine;
RX   PubMed=10329687; DOI=10.1074/jbc.274.21.14875;
RA   Wang H., Huang W., Fei Y.-J., Xia H., Yang-Feng T.L., Leibach F.H.,
RA   Devoe L.D., Ganapathy V., Prasad P.D.;
RT   "Human placental Na+-dependent multivitamin transporter. Cloning,
RT   functional expression, gene structure, and chromosomal localization.";
RL   J. Biol. Chem. 274:14875-14883(1999).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [MRNA], AND VARIANT PHE-481.
RC   TISSUE=Intestine;
RX   PubMed=10334869; DOI=10.1006/abbi.1999.1213;
RA   Prasad P.D., Wang H., Huang W., Fei Y.-J., Leibach F.H., Devoe L.D.,
RA   Ganapathy V.;
RT   "Molecular and functional characterization of the intestinal Na+-dependent
RT   multivitamin transporter.";
RL   Arch. Biochem. Biophys. 366:95-106(1999).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], AND VARIANT PHE-481.
RC   TISSUE=Placenta;
RX   PubMed=14702039; DOI=10.1038/ng1285;
RA   Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R.,
RA   Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H.,
RA   Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.,
RA   Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K.,
RA   Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H.,
RA   Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M.,
RA   Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K.,
RA   Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T.,
RA   Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M.,
RA   Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S.,
RA   Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H.,
RA   Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K.,
RA   Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N.,
RA   Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S.,
RA   Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O.,
RA   Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H.,
RA   Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B.,
RA   Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y.,
RA   Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K.,
RA   Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T.,
RA   Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T.,
RA   Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y.,
RA   Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H.,
RA   Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y.,
RA   Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H.,
RA   Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O.,
RA   Isogai T., Sugano S.;
RT   "Complete sequencing and characterization of 21,243 full-length human
RT   cDNAs.";
RL   Nat. Genet. 36:40-45(2004).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=15815621; DOI=10.1038/nature03466;
RA   Hillier L.W., Graves T.A., Fulton R.S., Fulton L.A., Pepin K.H., Minx P.,
RA   Wagner-McPherson C., Layman D., Wylie K., Sekhon M., Becker M.C.,
RA   Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E., Kremitzki C., Oddy L.,
RA   Du H., Sun H., Bradshaw-Cordum H., Ali J., Carter J., Cordes M., Harris A.,
RA   Isak A., van Brunt A., Nguyen C., Du F., Courtney L., Kalicki J.,
RA   Ozersky P., Abbott S., Armstrong J., Belter E.A., Caruso L., Cedroni M.,
RA   Cotton M., Davidson T., Desai A., Elliott G., Erb T., Fronick C., Gaige T.,
RA   Haakenson W., Haglund K., Holmes A., Harkins R., Kim K., Kruchowski S.S.,
RA   Strong C.M., Grewal N., Goyea E., Hou S., Levy A., Martinka S., Mead K.,
RA   McLellan M.D., Meyer R., Randall-Maher J., Tomlinson C.,
RA   Dauphin-Kohlberg S., Kozlowicz-Reilly A., Shah N., Swearengen-Shahid S.,
RA   Snider J., Strong J.T., Thompson J., Yoakum M., Leonard S., Pearman C.,
RA   Trani L., Radionenko M., Waligorski J.E., Wang C., Rock S.M.,
RA   Tin-Wollam A.-M., Maupin R., Latreille P., Wendl M.C., Yang S.-P., Pohl C.,
RA   Wallis J.W., Spieth J., Bieri T.A., Berkowicz N., Nelson J.O., Osborne J.,
RA   Ding L., Meyer R., Sabo A., Shotland Y., Sinha P., Wohldmann P.E.,
RA   Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Jones T.A., She X.,
RA   Ciccarelli F.D., Izaurralde E., Taylor J., Schmutz J., Myers R.M.,
RA   Cox D.R., Huang X., McPherson J.D., Mardis E.R., Clifton S.W., Warren W.C.,
RA   Chinwalla A.T., Eddy S.R., Marra M.A., Ovcharenko I., Furey T.S.,
RA   Miller W., Eichler E.E., Bork P., Suyama M., Torrents D., Waterston R.H.,
RA   Wilson R.K.;
RT   "Generation and annotation of the DNA sequences of human chromosomes 2 and
RT   4.";
RL   Nature 434:724-731(2005).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND VARIANT PHE-481.
RA   Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M.,
RA   Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J.,
RA   Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S.,
RA   Turner R., Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H.,
RA   Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K.,
RA   Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D.,
RA   Hunkapiller M.W., Myers E.W., Venter J.C.;
RL   Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
RN   [6]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   TISSUE=Brain;
RX   PubMed=15489334; DOI=10.1101/gr.2596504;
RG   The MGC Project Team;
RT   "The status, quality, and expansion of the NIH full-length cDNA project:
RT   the Mammalian Gene Collection (MGC).";
RL   Genome Res. 14:2121-2127(2004).
RN   [7]
RP   FUNCTION, AND BIOPHYSICOCHEMICAL PROPERTIES.
RX   PubMed=15561972; DOI=10.1152/ajprenal.00375.2004;
RA   Balamurugan K., Vaziri N.D., Said H.M.;
RT   "Biotin uptake by human proximal tubular epithelial cells: cellular and
RT   molecular aspects.";
RL   Am. J. Physiol. 288:F823-F831(2005).
RN   [8]
RP   INTERACTION WITH PDZD11.
RX   PubMed=21183659; DOI=10.1152/ajpgi.00530.2010;
RA   Nabokina S.M., Subramanian V.S., Said H.M.;
RT   "Association of PDZ-containing protein PDZD11 with the human sodium-
RT   dependent multivitamin transporter.";
RL   Am. J. Physiol. 300:G561-G567(2011).
RN   [9]
RP   FUNCTION, BIOPHYSICOCHEMICAL PROPERTIES, GLYCOSYLATION, AND MUTAGENESIS OF
RP   ASN-138; SER-283; THR-286; ASN-489; ASN-498 AND ASN-534.
RX   PubMed=21570947; DOI=10.1016/j.bbamem.2011.04.014;
RA   Ghosal A., Subramanian V.S., Said H.M.;
RT   "Role of the putative N-glycosylation and PKC-phosphorylation sites of the
RT   human sodium-dependent multivitamin transporter (hSMVT) in function and
RT   regulation.";
RL   Biochim. Biophys. Acta 1808:2073-2080(2011).
RN   [10]
RP   FUNCTION.
RX   PubMed=20980265; DOI=10.1074/jbc.m110.167197;
RA   de Carvalho F.D., Quick M.;
RT   "Surprising substrate versatility in SLC5A6: Na+-coupled I- transport by
RT   the human Na+/multivitamin transporter (hSMVT).";
RL   J. Biol. Chem. 286:131-137(2011).
RN   [11]
RP   FUNCTION, AND BIOPHYSICOCHEMICAL PROPERTIES.
RX   PubMed=22927035; DOI=10.1208/s12248-012-9399-5;
RA   Vadlapudi A.D., Vadlapatla R.K., Pal D., Mitra A.K.;
RT   "Functional and molecular aspects of biotin uptake via SMVT in human
RT   corneal epithelial (HCEC) and retinal pigment epithelial (D407) cells.";
RL   AAPS J. 14:832-842(2012).
RN   [12]
RP   FUNCTION, AND MUTAGENESIS OF CYS-68; CYS-104; CYS-144; CYS-187; CYS-294;
RP   CYS-309; CYS-358; CYS-410; CYS-443; CYS-450; CYS-577; CYS-583 AND CYS-628.
RX   PubMed=22015582; DOI=10.1016/j.bbamem.2011.10.003;
RA   Ghosal A., Said H.M.;
RT   "Cys(294) is essential for the function of the human sodium-dependent
RT   multivitamin transporter.";
RL   Biochim. Biophys. Acta 1818:97-102(2012).
RN   [13]
RP   FUNCTION.
RX   PubMed=25971966; DOI=10.1074/jbc.m114.622555;
RA   Zehnpfennig B., Wiriyasermkul P., Carlson D.A., Quick M.;
RT   "Interaction of alpha-Lipoic Acid with the Human Na+/Multivitamin
RT   Transporter (hSMVT).";
RL   J. Biol. Chem. 290:16372-16382(2015).
RN   [14]
RP   FUNCTION, SUBCELLULAR LOCATION, AND TISSUE SPECIFICITY.
RX   PubMed=25809983; DOI=10.1111/jnc.13092;
RA   Uchida Y., Ito K., Ohtsuki S., Kubo Y., Suzuki T., Terasaki T.;
RT   "Major involvement of Na(+) -dependent multivitamin transporter
RT   (SLC5A6/SMVT) in uptake of biotin and pantothenic acid by human brain
RT   capillary endothelial cells.";
RL   J. Neurochem. 134:97-112(2015).
RN   [15]
RP   FUNCTION, SUBCELLULAR LOCATION (MICROBIAL INFECTION), AND MUTAGENESIS OF
RP   THR-78; SER-128; SER-242; THR-366 AND THR-627.
RX   PubMed=28052864; DOI=10.1152/ajpcell.00300.2016;
RA   Lakhan R., Said H.M.;
RT   "Lipopolysaccharide inhibits colonic biotin uptake via interference with
RT   membrane expression of its transporter: a role for a casein kinase 2-
RT   mediated pathway.";
RL   Am. J. Physiol. 312:C376-C384(2017).
RN   [16]
RP   INVOLVEMENT IN NERIB, VARIANTS NERIB ARG-94--635-LEU DEL AND LEU-123,
RP   CHARACTERIZATION OF VARIANTS NERIB ARG-94--635-LEU DEL AND LEU-123,
RP   FUNCTION, AND SUBCELLULAR LOCATION.
RX   PubMed=27904971; DOI=10.1007/s00439-016-1751-x;
RA   Subramanian V.S., Constantinescu A.R., Benke P.J., Said H.M.;
RT   "Mutations in SLC5A6 associated with brain, immune, bone, and intestinal
RT   dysfunction in a young child.";
RL   Hum. Genet. 136:253-261(2017).
RN   [17]
RP   VARIANT NERIB THR-400, AND FUNCTION.
RX   PubMed=31754459; DOI=10.1038/s41525-019-0103-x;
RA   Byrne A.B., Arts P., Polyak S.W., Feng J., Schreiber A.W., Kassahn K.S.,
RA   Hahn C.N., Mordaunt D.A., Fletcher J.M., Lipsett J., Bratkovic D.,
RA   Booker G.W., Smith N.J., Scott H.S.;
RT   "Identification and targeted management of a neurodegenerative disorder
RT   caused by biallelic mutations in SLC5A6.";
RL   NPJ Genom. Med. 4:28-28(2019).
CC   -!- FUNCTION: Sodium-dependent multivitamin transporter that transports
CC       pantothenate, biotin and lipoate (PubMed:10329687, PubMed:15561972,
CC       PubMed:21570947, PubMed:20980265, PubMed:22927035, PubMed:22015582,
CC       PubMed:25971966, PubMed:25809983, PubMed:28052864, PubMed:27904971,
CC       PubMed:31754459). Required for biotin and pantothenate uptake in the
CC       instestine (By similarity). Plays a role in the maintenance of
CC       intestinal mucosa integrity, by providing the gut mucosa with biotin
CC       (By similarity). May play a role in the transport of biotin and
CC       pantothenate into the brain across the blood-brain barrier
CC       (PubMed:25809983). May also be involved in the sodium-dependent
CC       transport of iodide ions (PubMed:20980265).
CC       {ECO:0000250|UniProtKB:Q5U4D8, ECO:0000269|PubMed:10329687,
CC       ECO:0000269|PubMed:15561972, ECO:0000269|PubMed:20980265,
CC       ECO:0000269|PubMed:21570947, ECO:0000269|PubMed:22015582,
CC       ECO:0000269|PubMed:22927035, ECO:0000269|PubMed:25809983,
CC       ECO:0000269|PubMed:25971966, ECO:0000269|PubMed:27904971,
CC       ECO:0000269|PubMed:28052864, ECO:0000269|PubMed:31754459}.
CC   -!- BIOPHYSICOCHEMICAL PROPERTIES:
CC       Kinetic parameters:
CC         KM=12.16 uM for biotin (in proximal tubular epithelial cells at 37
CC         degrees Celsius and pH 7.4) {ECO:0000269|PubMed:15561972};
CC         KM=18.91 uM for biotin (in retinal pigment epithelial cells at 37
CC         degrees Celsius) {ECO:0000269|PubMed:21570947};
CC         KM=296.2 uM for biotin (in corneal epithelial cells at 37 degrees
CC         Celsius and pH 7.4) {ECO:0000269|PubMed:22927035};
CC         KM=863.8 uM for biotin (in retinal pigment epithelial cells at 37
CC         degrees Celsius and pH 7.4) {ECO:0000269|PubMed:22927035};
CC         Vmax=2.5 pmol/min/mg enzyme toward biotin (in proximal tubular
CC         epithelial cells at 37 degrees Celsius and pH 7.4)
CC         {ECO:0000269|PubMed:15561972};
CC         Vmax=0.0967 pmol/min/mg enzyme toward biotin (in retinal pigment
CC         epithelial cells at 37 degrees Celsius)
CC         {ECO:0000269|PubMed:21570947};
CC         Vmax=77.2 pmol/min/mg enzyme toward biotin (in corneal epithelial
CC         cells at 37 degrees Celsius and pH 7.4)
CC         {ECO:0000269|PubMed:22927035};
CC         Vmax=308.3 pmol/min/mg enzyme toward biotin (in retinal pigment
CC         epithelial cells at 37 degrees Celsius and pH 7.4)
CC         {ECO:0000269|PubMed:22927035};
CC   -!- SUBUNIT: Interacts with PDZD11. {ECO:0000269|PubMed:21183659}.
CC   -!- INTERACTION:
CC       Q9Y289; Q5EBL8: PDZD11; NbExp=6; IntAct=EBI-3915941, EBI-1644207;
CC   -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000269|PubMed:25809983,
CC       ECO:0000269|PubMed:27904971}; Multi-pass membrane protein
CC       {ECO:0000255}.
CC   -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000269|PubMed:28052864};
CC       Multi-pass membrane protein {ECO:0000255}. Note=(Microbial infection)
CC       Exposure to E.coli lipopolysaccharides leeds to reduced cell membrane
CC       localization. {ECO:0000269|PubMed:28052864}.
CC   -!- TISSUE SPECIFICITY: Expressed in microvessels of the brain (at protein
CC       level) (PubMed:25809983). Expressed in heart, brain, placenta, lung,
CC       liver, skeletal muscle, kidney, and pancreas (PubMed:10329687).
CC       {ECO:0000269|PubMed:10329687, ECO:0000269|PubMed:25809983}.
CC   -!- PTM: May be glycosylated. {ECO:0000269|PubMed:21570947}.
CC   -!- DISEASE: Neurodegeneration, infantile-onset, biotin-responsive (NERIB)
CC       [MIM:618973]: An autosomal recessive disorder characterized by early
CC       infantile onset, progressive neurodegeneration, global developmental
CC       delay, and developmental regression with loss of early motor and
CC       cognitive milestones. Additional variable features include seizures,
CC       ataxia, spasticity, peripheral neuropathy, immune defects, and
CC       osteopenia. Treatment with biotin, pantothenic acid, and lipoate may
CC       result in clinical improvement. {ECO:0000269|PubMed:27904971,
CC       ECO:0000269|PubMed:31754459}. Note=The disease is caused by variants
CC       affecting the gene represented in this entry.
CC   -!- SIMILARITY: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21)
CC       family. {ECO:0000305}.
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DR   EMBL; AF116241; AAD37502.1; -; Genomic_DNA.
DR   EMBL; AF069307; AAD31727.1; -; mRNA.
DR   EMBL; AF081571; AAD37481.1; -; mRNA.
DR   EMBL; AK314545; BAG37132.1; -; mRNA.
DR   EMBL; AC013403; AAX93172.1; -; Genomic_DNA.
DR   EMBL; CH471053; EAX00620.1; -; Genomic_DNA.
DR   EMBL; CH471053; EAX00621.1; -; Genomic_DNA.
DR   EMBL; CH471053; EAX00622.1; -; Genomic_DNA.
DR   EMBL; BC012806; AAH12806.1; -; mRNA.
DR   EMBL; BC015631; AAH15631.1; -; mRNA.
DR   CCDS; CCDS1740.1; -.
DR   RefSeq; NP_066918.2; NM_021095.2.
DR   RefSeq; XP_006712191.1; XM_006712128.1.
DR   RefSeq; XP_006712192.1; XM_006712129.1.
DR   RefSeq; XP_006712193.1; XM_006712130.1.
DR   AlphaFoldDB; Q9Y289; -.
DR   SMR; Q9Y289; -.
DR   BioGRID; 114403; 270.
DR   IntAct; Q9Y289; 7.
DR   MINT; Q9Y289; -.
DR   STRING; 9606.ENSP00000310208; -.
DR   DrugBank; DB00121; Biotin.
DR   DrugBank; DB08872; Gabapentin enacarbil.
DR   DrugBank; DB00166; Lipoic acid.
DR   TCDB; 2.A.21.5.7; the solute:sodium symporter (sss) family.
DR   GlyGen; Q9Y289; 3 sites.
DR   iPTMnet; Q9Y289; -.
DR   PhosphoSitePlus; Q9Y289; -.
DR   SwissPalm; Q9Y289; -.
DR   BioMuta; SLC5A6; -.
DR   DMDM; 229462745; -.
DR   EPD; Q9Y289; -.
DR   jPOST; Q9Y289; -.
DR   MassIVE; Q9Y289; -.
DR   MaxQB; Q9Y289; -.
DR   PaxDb; Q9Y289; -.
DR   PeptideAtlas; Q9Y289; -.
DR   PRIDE; Q9Y289; -.
DR   ProteomicsDB; 85700; -.
DR   Antibodypedia; 52501; 197 antibodies from 29 providers.
DR   DNASU; 8884; -.
DR   Ensembl; ENST00000310574.8; ENSP00000310208.3; ENSG00000138074.15.
DR   Ensembl; ENST00000408041.5; ENSP00000384853.1; ENSG00000138074.15.
DR   GeneID; 8884; -.
DR   KEGG; hsa:8884; -.
DR   MANE-Select; ENST00000310574.8; ENSP00000310208.3; NM_021095.4; NP_066918.2.
DR   UCSC; uc002rjd.4; human.
DR   CTD; 8884; -.
DR   DisGeNET; 8884; -.
DR   GeneCards; SLC5A6; -.
DR   HGNC; HGNC:11041; SLC5A6.
DR   HPA; ENSG00000138074; Tissue enhanced (liver).
DR   MalaCards; SLC5A6; -.
DR   MIM; 604024; gene.
DR   MIM; 618973; phenotype.
DR   neXtProt; NX_Q9Y289; -.
DR   OpenTargets; ENSG00000138074; -.
DR   PharmGKB; PA379; -.
DR   VEuPathDB; HostDB:ENSG00000138074; -.
DR   eggNOG; KOG2349; Eukaryota.
DR   GeneTree; ENSGT00940000155731; -.
DR   HOGENOM; CLU_018808_11_1_1; -.
DR   InParanoid; Q9Y289; -.
DR   OMA; YVFIHFI; -.
DR   OrthoDB; 327628at2759; -.
DR   PhylomeDB; Q9Y289; -.
DR   TreeFam; TF316728; -.
DR   PathwayCommons; Q9Y289; -.
DR   Reactome; R-HSA-196780; Biotin transport and metabolism.
DR   Reactome; R-HSA-199220; Vitamin B5 (pantothenate) metabolism.
DR   Reactome; R-HSA-425397; Transport of vitamins, nucleosides, and related molecules.
DR   SignaLink; Q9Y289; -.
DR   BioGRID-ORCS; 8884; 8 hits in 1075 CRISPR screens.
DR   ChiTaRS; SLC5A6; human.
DR   GeneWiki; SLC5A6; -.
DR   GenomeRNAi; 8884; -.
DR   Pharos; Q9Y289; Tbio.
DR   PRO; PR:Q9Y289; -.
DR   Proteomes; UP000005640; Chromosome 2.
DR   RNAct; Q9Y289; protein.
DR   Bgee; ENSG00000138074; Expressed in right lobe of liver and 141 other tissues.
DR   ExpressionAtlas; Q9Y289; baseline and differential.
DR   Genevisible; Q9Y289; HS.
DR   GO; GO:0016324; C:apical plasma membrane; ISS:ARUK-UCL.
DR   GO; GO:0009925; C:basal plasma membrane; ISS:ARUK-UCL.
DR   GO; GO:0016323; C:basolateral plasma membrane; ISS:ARUK-UCL.
DR   GO; GO:0031526; C:brush border membrane; IEA:Ensembl.
DR   GO; GO:0005887; C:integral component of plasma membrane; TAS:ProtInc.
DR   GO; GO:0016020; C:membrane; TAS:ProtInc.
DR   GO; GO:0005886; C:plasma membrane; IDA:UniProtKB.
DR   GO; GO:0012506; C:vesicle membrane; IEA:Ensembl.
DR   GO; GO:0015225; F:biotin transmembrane transporter activity; IDA:UniProtKB.
DR   GO; GO:0015233; F:pantothenate transmembrane transporter activity; IMP:ARUK-UCL.
DR   GO; GO:0008523; F:sodium-dependent multivitamin transmembrane transporter activity; IBA:GO_Central.
DR   GO; GO:0015293; F:symporter activity; IBA:GO_Central.
DR   GO; GO:0090482; F:vitamin transmembrane transporter activity; IDA:UniProtKB.
DR   GO; GO:1905135; P:biotin import across plasma membrane; IDA:UniProtKB.
DR   GO; GO:0015878; P:biotin transport; IBA:GO_Central.
DR   GO; GO:1904200; P:iodide transmembrane transport; IDA:UniProtKB.
DR   GO; GO:0015887; P:pantothenate transmembrane transport; IMP:ARUK-UCL.
DR   GO; GO:0006814; P:sodium ion transport; IBA:GO_Central.
DR   GO; GO:0150104; P:transport across blood-brain barrier; IMP:ARUK-UCL.
DR   Gene3D; 1.20.1730.10; -; 1.
DR   InterPro; IPR038377; Na/Glc_symporter_sf.
DR   InterPro; IPR001734; Na/solute_symporter.
DR   InterPro; IPR018212; Na/solute_symporter_CS.
DR   Pfam; PF00474; SSF; 1.
DR   TIGRFAMs; TIGR00813; sss; 1.
DR   PROSITE; PS00456; NA_SOLUT_SYMP_1; 1.
DR   PROSITE; PS50283; NA_SOLUT_SYMP_3; 1.
PE   1: Evidence at protein level;
KW   Biotin; Cell membrane; Disease variant; Glycoprotein; Ion transport;
KW   Membrane; Neurodegeneration; Reference proteome; Sodium; Sodium transport;
KW   Symport; Transmembrane; Transmembrane helix; Transport.
FT   CHAIN           1..635
FT                   /note="Sodium-dependent multivitamin transporter"
FT                   /id="PRO_0000105386"
FT   TRANSMEM        24..44
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        68..88
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        101..121
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        143..163
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        176..196
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        199..219
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        256..276
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        297..317
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        336..356
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        396..416
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        428..448
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        456..476
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        528..548
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        138
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        489
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        498
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   VARIANT         94..635
FT                   /note="Missing (in NERIB; reduced membrane localization;
FT                   impaired biotin transport; dbSNP:rs994218778)"
FT                   /evidence="ECO:0000269|PubMed:27904971"
FT                   /id="VAR_084535"
FT   VARIANT         123
FT                   /note="R -> L (in NERIB; reduced membrane localization;
FT                   impaired biotin transport)"
FT                   /evidence="ECO:0000269|PubMed:27904971"
FT                   /id="VAR_084536"
FT   VARIANT         400
FT                   /note="R -> T (in NERIB; impaired biotin transport;
FT                   dbSNP:rs370950187)"
FT                   /evidence="ECO:0000269|PubMed:31754459"
FT                   /id="VAR_084537"
FT   VARIANT         481
FT                   /note="S -> F (in dbSNP:rs1395)"
FT                   /evidence="ECO:0000269|PubMed:10329687,
FT                   ECO:0000269|PubMed:10334869, ECO:0000269|PubMed:14702039,
FT                   ECO:0000269|Ref.5"
FT                   /id="VAR_052491"
FT   VARIANT         492
FT                   /note="S -> N (in dbSNP:rs1064845)"
FT                   /id="VAR_052492"
FT   MUTAGEN         68
FT                   /note="C->A: No effect on biotin transport."
FT                   /evidence="ECO:0000269|PubMed:22015582"
FT   MUTAGEN         78
FT                   /note="T->A: Reduced membrane localization. Decrease in
FT                   biotin transport."
FT                   /evidence="ECO:0000269|PubMed:28052864"
FT   MUTAGEN         104
FT                   /note="C->A: No effect on biotin transport."
FT                   /evidence="ECO:0000269|PubMed:22015582"
FT   MUTAGEN         128
FT                   /note="S->A: No effect on biotin transport."
FT                   /evidence="ECO:0000269|PubMed:28052864"
FT   MUTAGEN         138
FT                   /note="N->A: Reduced protein levels. Decrease in biotin
FT                   transport."
FT                   /evidence="ECO:0000269|PubMed:21570947"
FT   MUTAGEN         144
FT                   /note="C->A: No effect on biotin transport."
FT                   /evidence="ECO:0000269|PubMed:22015582"
FT   MUTAGEN         187
FT                   /note="C->A: No effect on biotin transport."
FT                   /evidence="ECO:0000269|PubMed:22015582"
FT   MUTAGEN         242
FT                   /note="S->A: No effect on biotin transport."
FT                   /evidence="ECO:0000269|PubMed:28052864"
FT   MUTAGEN         283
FT                   /note="S->A: No effect on protein levels or membrane
FT                   localization."
FT                   /evidence="ECO:0000269|PubMed:21570947"
FT   MUTAGEN         286
FT                   /note="T->A: Resistant to phorbol 12-myristate 13-acetate
FT                   (PMA)-induced inhibition of biotin transport. No effect on
FT                   protein levels or membrane localization."
FT                   /evidence="ECO:0000269|PubMed:21570947"
FT   MUTAGEN         294
FT                   /note="C->A: Reduced membrane localization."
FT                   /evidence="ECO:0000269|PubMed:22015582"
FT   MUTAGEN         294
FT                   /note="C->A: Reduced membrane localization. Decrease in
FT                   biotin transport."
FT                   /evidence="ECO:0000269|PubMed:22015582"
FT   MUTAGEN         294
FT                   /note="C->S,M: Decrease in biotin transport."
FT                   /evidence="ECO:0000269|PubMed:22015582"
FT   MUTAGEN         309
FT                   /note="C->A: No effect on biotin transport."
FT                   /evidence="ECO:0000269|PubMed:22015582"
FT   MUTAGEN         358
FT                   /note="C->A: No effect on biotin transport."
FT                   /evidence="ECO:0000269|PubMed:22015582"
FT   MUTAGEN         366
FT                   /note="T->A: No effect on biotin transport."
FT                   /evidence="ECO:0000269|PubMed:28052864"
FT   MUTAGEN         410
FT                   /note="C->A: No effect on biotin transport."
FT                   /evidence="ECO:0000269|PubMed:22015582"
FT   MUTAGEN         443
FT                   /note="C->A: No effect on biotin transport."
FT                   /evidence="ECO:0000269|PubMed:22015582"
FT   MUTAGEN         450
FT                   /note="C->A: No effect on biotin transport."
FT                   /evidence="ECO:0000269|PubMed:22015582"
FT   MUTAGEN         489
FT                   /note="N->A: Slight decrease in protein levels. Decrease in
FT                   biotin transport."
FT                   /evidence="ECO:0000269|PubMed:21570947"
FT   MUTAGEN         498
FT                   /note="N->A: No effect on biotin transport."
FT                   /evidence="ECO:0000269|PubMed:21570947"
FT   MUTAGEN         534
FT                   /note="N->A: No effect on biotin transport."
FT                   /evidence="ECO:0000269|PubMed:21570947"
FT   MUTAGEN         577
FT                   /note="C->A: No effect on biotin transport."
FT                   /evidence="ECO:0000269|PubMed:22015582"
FT   MUTAGEN         583
FT                   /note="C->A: No effect on biotin transport."
FT                   /evidence="ECO:0000269|PubMed:22015582"
FT   MUTAGEN         627
FT                   /note="T->A: No effect on biotin transport."
FT                   /evidence="ECO:0000269|PubMed:28052864"
FT   MUTAGEN         628
FT                   /note="C->A,S: Decrease in biotin transport."
FT                   /evidence="ECO:0000269|PubMed:22015582"
SQ   SEQUENCE   635 AA;  68642 MW;  52A6E40DB337134F CRC64;
     MSVGVSTSAP LSPTSGTSVG MSTFSIMDYV VFVLLLVLSL AIGLYHACRG WGRHTVGELL
     MADRKMGCLP VALSLLATFQ SAVAILGVPS EIYRFGTQYW FLGCCYFLGL LIPAHIFIPV
     FYRLHLTSAY EYLELRFNKT VRVCGTVTFI FQMVIYMGVV LYAPSLALNA VTGFDLWLSV
     LALGIVCTVY TALGGLKAVI WTDVFQTLVM FLGQLAVIIV GSAKVGGLGR VWAVASQHGR
     ISGFELDPDP FVRHTFWTLA FGGVFMMLSL YGVNQAQVQR YLSSRTEKAA VLSCYAVFPF
     QQVSLCVGCL IGLVMFAYYQ EYPMSIQQAQ AAPDQFVLYF VMDLLKGLPG LPGLFIACLF
     SGSLSTISSA FNSLATVTME DLIRPWFPEF SEARAIMLSR GLAFGYGLLC LGMAYISSQM
     GPVLQAAISI FGMVGGPLLG LFCLGMFFPC ANPPGAVVGL LAGLVMAFWI GIGSIVTSMG
     SSMPPSPSNG SSFSLPTNLT VATVTTLMPL TTFSKPTGLQ RFYSLSYLWY SAHNSTTVIV
     VGLIVSLLTG RMRGRSLNPA TIYPVLPKLL SLLPLSCQKR LHCRSYGQDH LDTGLFPEKP
     RNGVLGDSRD KEAMALDGTA YQGSSSTCIL QETSL
 
 
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