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SCAM1_ORYSJ
ID   SCAM1_ORYSJ             Reviewed;         306 AA.
AC   Q8H5X5; B7E5U7;
DT   11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2003, sequence version 1.
DT   03-AUG-2022, entry version 97.
DE   RecName: Full=Secretory carrier-associated membrane protein 1;
DE            Short=Secretory carrier membrane protein 1;
GN   Name=SCAMP1; OrderedLocusNames=Os07g0564600, LOC_Os07g37740;
GN   ORFNames=OJ1112_E08.118, OsJ_023796;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA   Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA   Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA   Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA   McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
CC   -!- FUNCTION: Probably involved in membrane trafficking. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250}; Multi-pass membrane
CC       protein {ECO:0000250}. Cytoplasmic vesicle, secretory vesicle membrane
CC       {ECO:0000250}; Multi-pass membrane protein {ECO:0000250}.
CC   -!- SIMILARITY: Belongs to the SCAMP family. {ECO:0000305}.
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DR   EMBL; AP003705; BAC15812.1; -; Genomic_DNA.
DR   EMBL; AP008213; BAF21918.1; -; Genomic_DNA.
DR   EMBL; AP014963; BAT02167.1; -; Genomic_DNA.
DR   EMBL; CM000144; EAZ40313.1; -; Genomic_DNA.
DR   EMBL; AK061125; BAG87744.1; -; mRNA.
DR   EMBL; AK102110; BAG95389.1; -; mRNA.
DR   RefSeq; XP_015644814.1; XM_015789328.1.
DR   AlphaFoldDB; Q8H5X5; -.
DR   SMR; Q8H5X5; -.
DR   STRING; 4530.OS07T0564600-01; -.
DR   PaxDb; Q8H5X5; -.
DR   PRIDE; Q8H5X5; -.
DR   EnsemblPlants; Os07t0564600-01; Os07t0564600-01; Os07g0564600.
DR   EnsemblPlants; Os07t0564600-02; Os07t0564600-02; Os07g0564600.
DR   GeneID; 4343617; -.
DR   Gramene; Os07t0564600-01; Os07t0564600-01; Os07g0564600.
DR   Gramene; Os07t0564600-02; Os07t0564600-02; Os07g0564600.
DR   KEGG; osa:4343617; -.
DR   eggNOG; KOG3088; Eukaryota.
DR   HOGENOM; CLU_066546_3_0_1; -.
DR   InParanoid; Q8H5X5; -.
DR   OMA; NMVACIF; -.
DR   OrthoDB; 995882at2759; -.
DR   Proteomes; UP000000763; Chromosome 7.
DR   Proteomes; UP000007752; Chromosome 7.
DR   Proteomes; UP000059680; Chromosome 7.
DR   Genevisible; Q8H5X5; OS.
DR   GO; GO:0005769; C:early endosome; IDA:Gramene.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IDA:Gramene.
DR   GO; GO:0055038; C:recycling endosome membrane; IBA:GO_Central.
DR   GO; GO:0032588; C:trans-Golgi network membrane; IBA:GO_Central.
DR   GO; GO:0030658; C:transport vesicle membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0015031; P:protein transport; IBA:GO_Central.
DR   InterPro; IPR007273; SCAMP.
DR   PANTHER; PTHR10687; PTHR10687; 1.
DR   Pfam; PF04144; SCAMP; 1.
PE   2: Evidence at transcript level;
KW   Cell membrane; Coiled coil; Cytoplasmic vesicle; Membrane;
KW   Reference proteome; Transmembrane; Transmembrane helix; Transport.
FT   CHAIN           1..306
FT                   /note="Secretory carrier-associated membrane protein 1"
FT                   /id="PRO_0000304905"
FT   TOPO_DOM        1..141
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        142..162
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        174..194
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        209..229
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        257..277
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        278..306
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   REGION          1..66
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          72..109
FT                   /evidence="ECO:0000255"
SQ   SEQUENCE   306 AA;  34093 MW;  99AFE86F2DB76029 CRC64;
     MAGRYDSNPF EEDDVNPFSE QARGKAGGQP SYGGGAFYMP NPRNVPSVSS NSRLSPLPPE
     PAAFGATVDI PLDSSKDLKN REKELQAREA ELNKREKELK RREEAAARAG IVIEEKNWPP
     FLPLIHHDIT NEIPSHLQRM QYVAFASFLG LACCLFWNVI AVTSAWVKGE GVKIWLLAII
     YFISGVPGAY VLWYRPLYNA MRTDSALKFG LFFLVYLFHI LFCVFSAVAP PVVFEGKSLA
     GILPAIDLIS KNALVGIFYF VGFGLFCVES LLSIWVIQQV YMYFRGSGKA AEMKRDATRG
     AMRAAF
 
 
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