ID   SCL16_ARATH             Reviewed;         202 AA.
AC   Q2V2T9;
DT   23-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT   10-JAN-2006, sequence version 1.
DT   03-AUG-2022, entry version 82.
DE   RecName: Full=Putative scarecrow-like protein 16;
DE            Short=AtSCL16;
GN   Name=SCL16; OrderedLocusNames=At5g67411; ORFNames=K8K14;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=9501997; DOI=10.1093/dnares/4.6.401;
RA   Nakamura Y., Sato S., Kaneko T., Kotani H., Asamizu E., Miyajima N.,
RA   Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 5. III. Sequence
RT   features of the regions of 1,191,918 bp covered by seventeen physically
RT   assigned P1 clones.";
RL   DNA Res. 4:401-414(1997).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=17147637; DOI=10.1111/j.1467-7652.2006.00183.x;
RA   Underwood B.A., Vanderhaeghen R., Whitford R., Town C.D., Hilson P.;
RT   "Simultaneous high-throughput recombinational cloning of open reading
RT   frames in closed and open configurations.";
RL   Plant Biotechnol. J. 4:317-324(2006).
RN   [4]
RP   GENE FAMILY.
RX   PubMed=15316287; DOI=10.1023/b:plan.0000038256.89809.57;
RA   Tian C., Wan P., Sun S., Li J., Chen M.;
RT   "Genome-wide analysis of the GRAS gene family in rice and Arabidopsis.";
RL   Plant Mol. Biol. 54:519-532(2004).
RN   [5]
RP   GENE FAMILY, AND TISSUE SPECIFICITY.
RX   PubMed=18500650; DOI=10.1007/s11103-008-9345-1;
RA   Lee M.-H., Kim B., Song S.-K., Heo J.-O., Yu N.-I., Lee S.A., Kim M.,
RA   Kim D.G., Sohn S.O., Lim C.E., Chang K.S., Lee M.M., Lim J.;
RT   "Large-scale analysis of the GRAS gene family in Arabidopsis thaliana.";
RL   Plant Mol. Biol. 67:659-670(2008).
CC   -!- FUNCTION: Probable transcription factor involved in plant development.
CC       {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC   -!- TISSUE SPECIFICITY: Expressed in seedlings, leaves and flowers.
CC       {ECO:0000269|PubMed:18500650}.
CC   -!- SIMILARITY: Belongs to the GRAS family. {ECO:0000305}.
CC   -!- CAUTION: Lacks the VHIID motif which is one of the conserved features
CC       of the GRAS family. {ECO:0000305}.
CC   -!- CAUTION: Could be the product of a pseudogene. {ECO:0000305}.
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DR   EMBL; AB007645; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CP002688; AED98341.1; -; Genomic_DNA.
DR   EMBL; DQ487622; ABF59252.1; -; mRNA.
DR   RefSeq; NP_001032167.1; NM_001037090.2.
DR   AlphaFoldDB; Q2V2T9; -.
DR   SMR; Q2V2T9; -.
DR   BioGRID; 531935; 4.
DR   IntAct; Q2V2T9; 4.
DR   STRING; 3702.AT5G67411.1; -.
DR   PaxDb; Q2V2T9; -.
DR   PRIDE; Q2V2T9; -.
DR   EnsemblPlants; AT5G67411.1; AT5G67411.1; AT5G67411.
DR   GeneID; 3771574; -.
DR   Gramene; AT5G67411.1; AT5G67411.1; AT5G67411.
DR   KEGG; ath:AT5G67411; -.
DR   Araport; AT5G67411; -.
DR   TAIR; locus:1009023400; AT5G67411.
DR   eggNOG; ENOG502QR1S; Eukaryota.
DR   HOGENOM; CLU_011924_5_0_1; -.
DR   PhylomeDB; Q2V2T9; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; Q2V2T9; baseline and differential.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   InterPro; IPR005202; TF_GRAS.
DR   PANTHER; PTHR31636; PTHR31636; 1.
DR   Pfam; PF03514; GRAS; 1.
DR   PROSITE; PS50985; GRAS; 1.
PE   5: Uncertain;
KW   Nucleus; Reference proteome; Transcription; Transcription regulation.
FT   CHAIN           1..202
FT                   /note="Putative scarecrow-like protein 16"
FT                   /id="PRO_0000350858"
FT   DOMAIN          1..202
FT                   /note="GRAS"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT   REGION          1..26
FT                   /note="VHIID"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT   REGION          45..82
FT                   /note="Leucine repeat II (LRII)"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT   REGION          92..184
FT                   /note="PFYRE"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT   REGION          187..202
FT                   /note="SAW"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
SQ   SEQUENCE   202 AA;  23287 MW;  B0775015450B8F74 CRC64;
     MQIPTLIDSM ANKLHKKPPP LLKLTVIASD AEFHPPPLLG ISYEELGSKL VNFATTRNVA
     MEFRIISSSY SDGLSSLIEQ LRIDPFVFNE ALVVNCHMML HYIPDEILTS NLRSVFLKEL
     RDLNPTIVTL IDEDSDFTST NFISRLRSLY NYMWIPYDTA EMFLTRGSEQ RQWYEADISW
     KIDNVVAKEG AERVERLEPK SR