SCL34_ARATH
ID SCL34_ARATH Reviewed; 630 AA.
AC P0C884; O81074;
DT 23-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT 23-SEP-2008, sequence version 1.
DT 03-AUG-2022, entry version 74.
DE RecName: Full=Scarecrow-like protein 34;
DE Short=AtSCL34;
DE AltName: Full=GRAS family protein 12;
DE Short=AtGRAS-12;
GN Name=SCL34; OrderedLocusNames=At2g29065; ORFNames=T9I4.14;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15316287; DOI=10.1023/b:plan.0000038256.89809.57;
RA Tian C., Wan P., Sun S., Li J., Chen M.;
RT "Genome-wide analysis of the GRAS gene family in rice and Arabidopsis.";
RL Plant Mol. Biol. 54:519-532(2004).
RN [4]
RP GENE FAMILY.
RX PubMed=18500650; DOI=10.1007/s11103-008-9345-1;
RA Lee M.-H., Kim B., Song S.-K., Heo J.-O., Yu N.-I., Lee S.A., Kim M.,
RA Kim D.G., Sohn S.O., Lim C.E., Chang K.S., Lee M.M., Lim J.;
RT "Large-scale analysis of the GRAS gene family in Arabidopsis thaliana.";
RL Plant Mol. Biol. 67:659-670(2008).
CC -!- FUNCTION: Probable transcription factor involved in plant development.
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the GRAS family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAC33232.1; Type=Erroneous gene model prediction; Note=The predicted gene At2g29060 has been split into 2 genes: At2g29060 and At2g29065.; Evidence={ECO:0000305};
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DR EMBL; AC005315; AAC33232.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002685; AEC08205.1; -; Genomic_DNA.
DR PIR; T02736; T02736.
DR RefSeq; NP_001189628.1; NM_001202699.2.
DR AlphaFoldDB; P0C884; -.
DR SMR; P0C884; -.
DR STRING; 3702.AT2G29065.1; -.
DR PaxDb; P0C884; -.
DR PRIDE; P0C884; -.
DR ProteomicsDB; 232811; -.
DR EnsemblPlants; AT2G29065.1; AT2G29065.1; AT2G29065.
DR GeneID; 10723125; -.
DR Gramene; AT2G29065.1; AT2G29065.1; AT2G29065.
DR KEGG; ath:AT2G29065; -.
DR Araport; AT2G29065; -.
DR TAIR; locus:6530298185; AT2G29065.
DR eggNOG; ENOG502QSQ6; Eukaryota.
DR HOGENOM; CLU_011924_2_2_1; -.
DR OMA; CCNDNEN; -.
DR OrthoDB; 202454at2759; -.
DR PRO; PR:P0C884; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; P0C884; baseline and differential.
DR Genevisible; P0C884; AT.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR GO; GO:0043565; F:sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IBA:GO_Central.
DR InterPro; IPR005202; TF_GRAS.
DR PANTHER; PTHR31636; PTHR31636; 2.
DR Pfam; PF03514; GRAS; 1.
DR PROSITE; PS50985; GRAS; 1.
PE 3: Inferred from homology;
KW Nucleus; Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..630
FT /note="Scarecrow-like protein 34"
FT /id="PRO_0000350871"
FT DOMAIN 240..628
FT /note="GRAS"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT REGION 247..312
FT /note="Leucine repeat I (LRI)"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT REGION 331..396
FT /note="VHIID"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT REGION 412..444
FT /note="Leucine repeat II (LRII)"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT REGION 454..549
FT /note="PFYRE"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT REGION 552..628
FT /note="SAW"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT MOTIF 362..366
FT /note="VHIID"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
SQ SEQUENCE 630 AA; 72529 MW; BF7A1D1800487912 CRC64;
MDPNFSESLN GFEYFDGNPN LLTDPMEDQY PPPSDTLLKY VSEILMEESN GDYKQSMFYD
SLALRKTEEM LQQVITDSQN QSFSPADSLI TNSWDASGSI DESAYSADPQ PVNEIMVKSM
FSDAESALQF KKGVEEASKF LPNSDQWVIN LDIERSERRD SVKEEMGLDQ LRVKKNHERD
FEEVRSSKQF ASNVEDSKVT DMFDKVLLLD GECDPQTLLD SEIQAIRSSK NIGEKGKKKK
KKKSQVVDFR TLLTHCAQAI STGDKTTALE FLLQIRQQSS PLGDAGQRLA HCFANALEAR
LQGSTGPMIQ TYYNALTSSL KDTAADTIRA YRVYLSSSPF VTLMYFFSIW MILDVAKDAP
VLHIVDFGIL YGFQWPMFIQ SISDRKDVPR KLRITGIELP QCGFRPAERI EETGRRLAEY
CKRFNVPFEY KAIASQNWET IRIEDLDIRP NEVLAVNAGL RLKNLQDETG SEENCPRDAV
LKLIRNMNPD VFIHAIVNGS FNAPFFISRF KEAVYHYSAL FDMFDSTLPR DNKERIRFER
EFYGREAMNV IACEEADRVE RPETYRQWQV RMVRAGFKQK TIKPELVELF RGKLKKWRYH
KDFVVDENSK WLLQGWKGRT LYASSCWVPA
