ID   SCL9_ARATH              Reviewed;         718 AA.
AC   O80933; Q9SYQ5;
DT   23-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT   01-NOV-1998, sequence version 1.
DT   03-AUG-2022, entry version 103.
DE   RecName: Full=Scarecrow-like protein 9;
DE            Short=AtSCL9;
DE   AltName: Full=GRAS family protein 13;
DE            Short=AtGRAS-13;
GN   Name=SCL9; OrderedLocusNames=At2g37650; ORFNames=F13M22.15;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10617197; DOI=10.1038/45471;
RA   Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA   Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA   Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA   Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA   Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA   Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA   Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT   "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL   Nature 402:761-768(1999).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [MRNA] OF 586-718.
RX   PubMed=10341448; DOI=10.1046/j.1365-313x.1999.00431.x;
RA   Pysh L.D., Wysocka-Diller J.W., Camilleri C., Bouchez D., Benfey P.N.;
RT   "The GRAS gene family in Arabidopsis: sequence characterization and basic
RT   expression analysis of the SCARECROW-LIKE genes.";
RL   Plant J. 18:111-119(1999).
RN   [4]
RP   GENE FAMILY.
RX   PubMed=15316287; DOI=10.1023/b:plan.0000038256.89809.57;
RA   Tian C., Wan P., Sun S., Li J., Chen M.;
RT   "Genome-wide analysis of the GRAS gene family in rice and Arabidopsis.";
RL   Plant Mol. Biol. 54:519-532(2004).
RN   [5]
RP   GENE FAMILY, AND TISSUE SPECIFICITY.
RX   PubMed=18500650; DOI=10.1007/s11103-008-9345-1;
RA   Lee M.-H., Kim B., Song S.-K., Heo J.-O., Yu N.-I., Lee S.A., Kim M.,
RA   Kim D.G., Sohn S.O., Lim C.E., Chang K.S., Lee M.M., Lim J.;
RT   "Large-scale analysis of the GRAS gene family in Arabidopsis thaliana.";
RL   Plant Mol. Biol. 67:659-670(2008).
CC   -!- FUNCTION: Probable transcription factor involved in plant development.
CC       {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC   -!- TISSUE SPECIFICITY: Expressed in cotyledons, leaves and flowers, and in
CC       the elongation zone in root. {ECO:0000269|PubMed:18500650}.
CC   -!- SIMILARITY: Belongs to the GRAS family. {ECO:0000305}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AC004684; AAC23635.1; -; Genomic_DNA.
DR   EMBL; CP002685; AEC09430.1; -; Genomic_DNA.
DR   EMBL; AF036306; AAD24409.1; -; mRNA.
DR   PIR; T02531; T02531.
DR   PIR; T51240; T51240.
DR   RefSeq; NP_181301.1; NM_129321.2.
DR   AlphaFoldDB; O80933; -.
DR   SMR; O80933; -.
DR   STRING; 3702.AT2G37650.1; -.
DR   PaxDb; O80933; -.
DR   PRIDE; O80933; -.
DR   ProteomicsDB; 232914; -.
DR   EnsemblPlants; AT2G37650.1; AT2G37650.1; AT2G37650.
DR   GeneID; 818342; -.
DR   Gramene; AT2G37650.1; AT2G37650.1; AT2G37650.
DR   KEGG; ath:AT2G37650; -.
DR   Araport; AT2G37650; -.
DR   TAIR; locus:2040701; AT2G37650.
DR   eggNOG; ENOG502QSQ6; Eukaryota.
DR   HOGENOM; CLU_011924_2_2_1; -.
DR   InParanoid; O80933; -.
DR   OrthoDB; 278485at2759; -.
DR   PhylomeDB; O80933; -.
DR   PRO; PR:O80933; -.
DR   Proteomes; UP000006548; Chromosome 2.
DR   ExpressionAtlas; O80933; baseline and differential.
DR   Genevisible; O80933; AT.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IBA:GO_Central.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IBA:GO_Central.
DR   InterPro; IPR005202; TF_GRAS.
DR   PANTHER; PTHR31636; PTHR31636; 1.
DR   Pfam; PF03514; GRAS; 1.
DR   PROSITE; PS50985; GRAS; 1.
PE   2: Evidence at transcript level;
KW   Nucleus; Reference proteome; Transcription; Transcription regulation.
FT   CHAIN           1..718
FT                   /note="Scarecrow-like protein 9"
FT                   /id="PRO_0000350853"
FT   DOMAIN          335..713
FT                   /note="GRAS"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT   REGION          305..338
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          342..402
FT                   /note="Leucine repeat I (LRI)"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT   REGION          421..484
FT                   /note="VHIID"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT   REGION          500..532
FT                   /note="Leucine repeat II (LRII)"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT   REGION          541..635
FT                   /note="PFYRE"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT   REGION          638..713
FT                   /note="SAW"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT   MOTIF           452..456
FT                   /note="VHIID"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT   COMPBIAS        305..319
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   718 AA;  80915 MW;  754D23EC862FEA9D CRC64;
     MITEPSLTGI SGMVNRNRLS GLPDQPSSHS FTPVTLYDGF NYNLSSDHIN TVVAAPENSV
     FIREEEEEED PADDFDFSDA VLGYISQMLN EEDMDDKVCM LQESLDLEAA ERSLYEAIGK
     KYPPSPERNL AFAERNSENL DRVVPGNYTG GDCIGFGNGG IKPLSSGFTL DFRNPQSCSS
     ILSVPQSNGL ITIYGDGIDE SSKNNRENHQ SVWLFRREIE EANRFNPEEN ELIVNFREEN
     CVSKARKNSS RDEICVEEER SSKLPAVFGE DILRSDVVDK ILVHVPGGES MKEFNALRDV
     LKKGVEKKKA SDAQGGKRRA RGRGRGRGRG GGGGQNGKKE VVDLRSLLIH CAQAVAADDR
     RCAGQLLKQI RLHSTPFGDG NQRLAHCFAN GLEARLAGTG SQIYKGIVSK PRSAAAVLKA
     HQLFLACCPF RKLSYFITNK TIRDLVGNSQ RVHVIDFGIL YGFQWPTLIH RFSMYGSPKV
     RITGIEFPQP GFRPAQRVEE TGQRLAAYAK LFGVPFEYKA IAKKWDAIQL EDLDIDRDEI
     TVVNCLYRAE NLHDESVKVE SCRDTVLNLI GKINPDLFVF GIVNGAYNAP FFVTRFREAL
     FHFSSIFDML ETIVPREDEE RMFLEMEVFG REALNVIACE GWERVERPET YKQWHVRAMR
     SGLVQVPFDP SIMKTSLHKV HTFYHKDFVI DQDNRWLLQG WKGRTVMALS VWKPESKA