SCP41_ARATH
ID SCP41_ARATH Reviewed; 469 AA.
AC Q9FH06;
DT 06-FEB-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 114.
DE RecName: Full=Serine carboxypeptidase-like 41;
DE EC=3.4.16.-;
DE Flags: Precursor;
GN Name=SCPL41; OrderedLocusNames=At5g42230; ORFNames=K5J14.3;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP GENE FAMILY, TISSUE SPECIFICITY, AND NOMENCLATURE.
RX PubMed=15908604; DOI=10.1104/pp.104.057950;
RA Fraser C.M., Rider L.W., Chapple C.;
RT "An expression and bioinformatics analysis of the Arabidopsis serine
RT carboxypeptidase-like gene family.";
RL Plant Physiol. 138:1136-1148(2005).
CC -!- FUNCTION: Probable carboxypeptidase. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Expressed in flowers.
CC {ECO:0000269|PubMed:15908604}.
CC -!- SIMILARITY: Belongs to the peptidase S10 family. {ECO:0000305}.
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DR EMBL; AB023032; BAB10196.1; -; Genomic_DNA.
DR EMBL; CP002688; AED94783.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM70035.1; -; Genomic_DNA.
DR EMBL; BT002948; AAO22761.1; -; mRNA.
DR EMBL; BT004386; AAO42380.1; -; mRNA.
DR RefSeq; NP_001318730.1; NM_001344440.1.
DR RefSeq; NP_199038.1; NM_123588.4.
DR AlphaFoldDB; Q9FH06; -.
DR SMR; Q9FH06; -.
DR STRING; 3702.AT5G42230.1; -.
DR ESTHER; arath-SCP41; Carboxypeptidase_S10.
DR MEROPS; S10.A22; -.
DR PaxDb; Q9FH06; -.
DR PRIDE; Q9FH06; -.
DR ProteomicsDB; 232771; -.
DR EnsemblPlants; AT5G42230.1; AT5G42230.1; AT5G42230.
DR EnsemblPlants; AT5G42230.2; AT5G42230.2; AT5G42230.
DR GeneID; 834228; -.
DR Gramene; AT5G42230.1; AT5G42230.1; AT5G42230.
DR Gramene; AT5G42230.2; AT5G42230.2; AT5G42230.
DR KEGG; ath:AT5G42230; -.
DR Araport; AT5G42230; -.
DR TAIR; locus:2157612; AT5G42230.
DR eggNOG; KOG1282; Eukaryota.
DR HOGENOM; CLU_008523_13_1_1; -.
DR InParanoid; Q9FH06; -.
DR OMA; THMSIGV; -.
DR OrthoDB; 625787at2759; -.
DR PhylomeDB; Q9FH06; -.
DR PRO; PR:Q9FH06; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FH06; baseline and differential.
DR Genevisible; Q9FH06; AT.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0004185; F:serine-type carboxypeptidase activity; IBA:GO_Central.
DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.1820; -; 1.
DR InterPro; IPR029058; AB_hydrolase.
DR InterPro; IPR001563; Peptidase_S10.
DR InterPro; IPR018202; Ser_caboxypep_ser_AS.
DR PANTHER; PTHR11802; PTHR11802; 1.
DR Pfam; PF00450; Peptidase_S10; 1.
DR PRINTS; PR00724; CRBOXYPTASEC.
DR SUPFAM; SSF53474; SSF53474; 1.
DR PROSITE; PS00131; CARBOXYPEPT_SER_SER; 1.
PE 2: Evidence at transcript level;
KW Carboxypeptidase; Disulfide bond; Glycoprotein; Hydrolase; Protease;
KW Reference proteome; Secreted; Signal.
FT SIGNAL 1..20
FT /evidence="ECO:0000255"
FT CHAIN 21..469
FT /note="Serine carboxypeptidase-like 41"
FT /id="PRO_0000274656"
FT ACT_SITE 175
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10074"
FT ACT_SITE 379
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10074"
FT ACT_SITE 436
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10074"
FT CARBOHYD 134
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 255
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 331
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 347
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 461
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT DISULFID 83..342
FT /evidence="ECO:0000250"
FT DISULFID 243..260
FT /evidence="ECO:0000250"
FT DISULFID 285..310
FT /evidence="ECO:0000250"
SQ SEQUENCE 469 AA; 52541 MW; 90357E27B9B64527 CRC64;
MAIVSLRDVA MVMVTVQVFA RGYPETDLVV RLPGQPKVVF RQYAGYVDLD LNAGRSLFYY
FVEAEKHPDT KPLTLWLNGG PGCSSVGGGA FTELGPFYPT GYGRGLRINS MSWNKASNLL
FVDSPAGVGW SYSNRSSDYN AGDKSAASDM LVFLLRWFDK FPELKSHDLF LTGESYAGHY
IPQLADAILS YNSRSSGFKF NIKGIAIGNP LLKLDRDIPA VYEFFWSHGM ISEVVGRTIK
IQCDFSHYTY AYPHNVSDAC NDAIREAGDI TTEYVNTFDV LPDLCYPSIA LQELRLKQMA
TKMSMGVDVC MNYERQFYLN IPEVQMALHA NRTNLPYSWS LCSNLLNYSA IDVNTNMLPT
LKRIIQNKIP VRIFSGDQDS VVPFLGTRTI VGELANDLNF KTTVPYGVWF HKRQVGGWAI
EYGNLLTFAT VRGAAHAVAY TQPSRALHLF STFLRGQRLP NKTDIAMHD