SCP_HHV6U
ID SCP_HHV6U Reviewed; 88 AA.
AC Q69560;
DT 01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 02-JUN-2021, entry version 58.
DE RecName: Full=Small capsomere-interacting protein {ECO:0000255|HAMAP-Rule:MF_04021};
GN Name=SCP {ECO:0000255|HAMAP-Rule:MF_04021}; Synonyms=U32;
OS Human herpesvirus 6A (strain Uganda-1102) (HHV-6 variant A) (Human B
OS lymphotropic virus).
OC Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes;
OC Herpesvirales; Herpesviridae; Betaherpesvirinae; Roseolovirus.
OX NCBI_TaxID=10370;
OH NCBI_TaxID=9606; Homo sapiens (Human).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=8289364; DOI=10.1128/jvi.68.2.597-610.1994;
RA Nicholas J., Martin M.E.D.;
RT "Nucleotide sequence analysis of a 38.5-kilobase-pair region of the genome
RT of human herpesvirus 6 encoding human cytomegalovirus immediate-early gene
RT homologs and transactivating functions.";
RL J. Virol. 68:597-610(1994).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=7747482; DOI=10.1006/viro.1995.1228;
RA Gompels U.A., Nicholas J., Lawrence G.L., Jones M., Thomson B.J.,
RA Martin M.E.D., Efstathiou S., Craxton M.A., Macaulay H.A.;
RT "The DNA sequence of human herpesvirus-6: structure, coding content, and
RT genome evolution.";
RL Virology 209:29-51(1995).
CC -!- FUNCTION: Participates in the assembly of the infectious particles by
CC decorating the outer surface of the capsid shell and thus forming a
CC layer between the capsid and the tegument. Complexes composed of the
CC major capsid protein and small capsomere-interacting protein/SCP
CC assemble together in the host cytoplasm and are translocated to the
CC nucleus, where they accumulate and participate in capsid assembly.
CC {ECO:0000255|HAMAP-Rule:MF_04021}.
CC -!- SUBUNIT: Interacts with the major capsid protein/MCP.
CC {ECO:0000255|HAMAP-Rule:MF_04021}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000255|HAMAP-Rule:MF_04021}. Host
CC nucleus {ECO:0000255|HAMAP-Rule:MF_04021}.
CC -!- SIMILARITY: Belongs to the herpesviridae small capsomere-interacting
CC protein family. {ECO:0000255|HAMAP-Rule:MF_04021}.
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DR EMBL; L25528; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; X83413; CAA58412.1; -; Genomic_DNA.
DR RefSeq; NP_042925.1; NC_001664.2.
DR SMR; Q69560; -.
DR PRIDE; Q69560; -.
DR DNASU; 1487909; -.
DR GeneID; 1487909; -.
DR KEGG; vg:1487909; -.
DR Proteomes; UP000009295; Genome.
DR GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0019028; C:viral capsid; IEA:UniProtKB-UniRule.
DR GO; GO:0016032; P:viral process; IEA:UniProtKB-UniRule.
DR HAMAP; MF_04021; HSV_SCP_betahv; 1.
DR InterPro; IPR031385; HV_small_capsid.
DR Pfam; PF17086; HV_small_capsid; 1.
PE 3: Inferred from homology;
KW Capsid protein; Host nucleus; Reference proteome; Virion.
FT CHAIN 1..88
FT /note="Small capsomere-interacting protein"
FT /id="PRO_0000342580"
FT REGION 1..30
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..18
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 88 AA; 9741 MW; AC2A594D43719B53 CRC64;
MTTIRSDDLS NQITQISGSS KKEEEKKKQQ MLTGVLGLQP NMASHPVLGV FLPKYAKQNG
GNVDKTAFRL DLIRMLALHR LNTKTGSD