SCP_HHV6Z
ID SCP_HHV6Z Reviewed; 89 AA.
AC Q9WT32; Q77PU9;
DT 03-MAY-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1999, sequence version 1.
DT 02-JUN-2021, entry version 51.
DE RecName: Full=Small capsomere-interacting protein {ECO:0000255|HAMAP-Rule:MF_04021};
GN Name=SCP {ECO:0000255|HAMAP-Rule:MF_04021}; Synonyms=U32;
OS Human herpesvirus 6B (strain Z29) (HHV-6 variant B) (Human B lymphotropic
OS virus).
OC Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes;
OC Herpesvirales; Herpesviridae; Betaherpesvirinae; Roseolovirus.
OX NCBI_TaxID=36351;
OH NCBI_TaxID=9606; Homo sapiens (Human).
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HST;
RX PubMed=10482554; DOI=10.1128/jvi.73.10.8053-8063.1999;
RA Isegawa Y., Mukai T., Nakano K., Kagawa M., Chen J., Mori Y., Sunagawa T.,
RA Kawanishi K., Sashihara J., Hata A., Zou P., Kosuge H., Yamanishi K.;
RT "Comparison of the complete DNA sequences of human herpesvirus 6 variants A
RT and B.";
RL J. Virol. 73:8053-8063(1999).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=10482553; DOI=10.1128/jvi.73.10.8040-8052.1999;
RA Dominguez G., Dambaugh T.R., Stamey F.R., Dewhurst S., Inoue N.,
RA Pellett P.E.;
RT "Human herpesvirus 6B genome sequence: coding content and comparison with
RT human herpesvirus 6A.";
RL J. Virol. 73:8040-8052(1999).
CC -!- FUNCTION: Participates in the assembly of the infectious particles by
CC decorating the outer surface of the capsid shell and thus forming a
CC layer between the capsid and the tegument. Complexes composed of the
CC major capsid protein and small capsomere-interacting protein/SCP
CC assemble together in the host cytoplasm and are translocated to the
CC nucleus, where they accumulate and participate in capsid assembly.
CC {ECO:0000255|HAMAP-Rule:MF_04021}.
CC -!- SUBUNIT: Interacts with the major capsid protein/MCP.
CC {ECO:0000255|HAMAP-Rule:MF_04021}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000255|HAMAP-Rule:MF_04021}. Host
CC nucleus {ECO:0000255|HAMAP-Rule:MF_04021}.
CC -!- SIMILARITY: Belongs to the herpesviridae small capsomere-interacting
CC protein family. {ECO:0000255|HAMAP-Rule:MF_04021}.
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DR EMBL; AF157706; AAD49646.1; -; Genomic_DNA.
DR EMBL; AB021506; BAA78253.1; -; Genomic_DNA.
DR PIR; T43992; T43992.
DR RefSeq; NP_050213.1; NC_000898.1.
DR PDB; 6Q1F; EM; 9.00 A; 1/2/3/4/J/K/L/M/N/O/P/Q/R/x/y/z=1-89.
DR PDBsum; 6Q1F; -.
DR SMR; Q9WT32; -.
DR PRIDE; Q9WT32; -.
DR DNASU; 1497034; -.
DR GeneID; 1497034; -.
DR KEGG; vg:1497034; -.
DR Proteomes; UP000006930; Genome.
DR Proteomes; UP000142685; Genome.
DR GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0019028; C:viral capsid; IEA:UniProtKB-UniRule.
DR GO; GO:0016032; P:viral process; IEA:UniProtKB-UniRule.
DR HAMAP; MF_04021; HSV_SCP_betahv; 1.
DR InterPro; IPR031385; HV_small_capsid.
DR Pfam; PF17086; HV_small_capsid; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Capsid protein; Host nucleus; Reference proteome; Virion.
FT CHAIN 1..89
FT /note="Small capsomere-interacting protein"
FT /id="PRO_0000408428"
FT REGION 1..31
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..19
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 89 AA; 9812 MW; 33A9E8FDA08B87C7 CRC64;
MTTIRGDDLS NQITQISGSS SKKEEEKKKQ QMLTGVLGLQ PTMANHPVLG VFLPKYAKQN
GGNVDKTAFR LDLIRMLALH RLNTKTGSD