SCX_CHICK
ID SCX_CHICK Reviewed; 187 AA.
AC P59101;
DT 25-NOV-2002, integrated into UniProtKB/Swiss-Prot.
DT 25-NOV-2002, sequence version 1.
DT 03-AUG-2022, entry version 91.
DE RecName: Full=Basic helix-loop-helix transcription factor scleraxis;
GN Name=SCX;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=11585810; DOI=10.1242/dev.128.19.3855;
RA Schweitzer R., Chyung J.H., Murtaugh L.C., Brent A.E., Rosen V.,
RA Olson E.N., Lassar A., Tabin C.J.;
RT "Analysis of the tendon cell fate using Scleraxis, a specific marker for
RT tendons and ligaments.";
RL Development 128:3855-3866(2001).
CC -!- FUNCTION: Plays an early essential role in mesoderm formation, as well
CC as a later role in formation of somite-derived chondrogenic lineages.
CC -!- SUBUNIT: Efficient DNA binding requires dimerization with another bHLH
CC protein. Dimerizes and binds the E-box consensus sequence with E12.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00981}.
CC -!- TISSUE SPECIFICITY: Expressed in the intersomitic, the superficial
CC proximomedial limb mesenchyme and the subectodermal mesenchyme.
CC -!- DEVELOPMENTAL STAGE: At stage 21, expressed in leg buds in a
CC superficial proximomedial domain, expression is enhanced by stage 23.
CC By stage 29, expression is elaborated to include both leg and wing. By
CC stage 35, expressed in all muscle-to-bone attachment sites. Expressed
CC also in a wing aponeurosis, a tendinous element arranged in flattened
CC bands, and in some of the flattened sheets of connective tissue
CC associated with muscle.
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DR EMBL; AF505881; AAM33337.1; -; mRNA.
DR RefSeq; NP_989584.1; NM_204253.1.
DR AlphaFoldDB; P59101; -.
DR SMR; P59101; -.
DR Ensembl; ENSGALT00000062465; ENSGALP00000051519; ENSGALG00000043433.
DR GeneID; 374101; -.
DR KEGG; gga:374101; -.
DR CTD; 642658; -.
DR VEuPathDB; HostDB:geneid_374101; -.
DR GeneTree; ENSGT00940000161897; -.
DR InParanoid; P59101; -.
DR OMA; LLVGETC; -.
DR OrthoDB; 1511100at2759; -.
DR PhylomeDB; P59101; -.
DR PRO; PR:P59101; -.
DR Proteomes; UP000000539; Chromosome 2.
DR Bgee; ENSGALG00000043433; Expressed in skeletal muscle tissue.
DR ExpressionAtlas; P59101; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0000977; F:RNA polymerase II transcription regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0071773; P:cellular response to BMP stimulus; IEP:UniProtKB.
DR GO; GO:0044344; P:cellular response to fibroblast growth factor stimulus; IEP:UniProtKB.
DR GO; GO:0032502; P:developmental process; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR GO; GO:0061056; P:sclerotome development; IEP:UniProtKB.
DR GO; GO:0035989; P:tendon development; IEP:UniProtKB.
DR Gene3D; 4.10.280.10; -; 1.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR Pfam; PF00010; HLH; 1.
DR SMART; SM00353; HLH; 1.
DR SUPFAM; SSF47459; SSF47459; 1.
DR PROSITE; PS50888; BHLH; 1.
PE 2: Evidence at transcript level;
KW Activator; Developmental protein; DNA-binding; Nucleus; Reference proteome;
KW Transcription; Transcription regulation.
FT CHAIN 1..187
FT /note="Basic helix-loop-helix transcription factor
FT scleraxis"
FT /id="PRO_0000127437"
FT DOMAIN 67..119
FT /note="bHLH"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00981"
FT REGION 21..83
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 140..163
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 31..51
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 187 AA; 20562 MW; F789683077C2FC1B CRC64;
MSFAMLRPAA GRYLYPEISM LSEDEENGSE SSGSDEKPFH LDADGFGIKA GKRRSGKKAG
RLHREPRQRH TANARERDRT NSVNTAFTAL RTLIPTEPAD RKLSKIETLR LASSYISHLG
NVLLVGEACG DGQPCHTSPA FFHHGGGGGS PPPRDSENSQ PKQICTFCLS NQRKLSKDRD
RKTAIRS