SDA1_DANRE
ID SDA1_DANRE Reviewed; 682 AA.
AC Q6NV26; Q8JHJ0;
DT 15-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 82.
DE RecName: Full=Protein SDA1 homolog;
DE AltName: Full=SDA1 domain-containing protein 1;
GN Name=sdad1;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=12006978; DOI=10.1038/ng896;
RA Golling G., Amsterdam A., Sun Z., Antonelli M., Maldonado E., Chen W.,
RA Burgess S., Haldi M., Artzt K., Farrington S., Lin S.-Y., Nissen R.M.,
RA Hopkins N.;
RT "Insertional mutagenesis in zebrafish rapidly identifies genes essential
RT for early vertebrate development.";
RL Nat. Genet. 31:135-140(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Kidney;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Required for 60S pre-ribosomal subunits export to the
CC cytoplasm. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the SDA1 family. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AF506206; AAM34650.1; -; mRNA.
DR EMBL; BC068340; AAH68340.1; -; mRNA.
DR RefSeq; NP_775337.1; NM_173230.1.
DR AlphaFoldDB; Q6NV26; -.
DR SMR; Q6NV26; -.
DR STRING; 7955.ENSDARP00000090568; -.
DR PaxDb; Q6NV26; -.
DR PRIDE; Q6NV26; -.
DR GeneID; 286746; -.
DR KEGG; dre:286746; -.
DR CTD; 55153; -.
DR ZFIN; ZDB-GENE-021213-1; sdad1.
DR eggNOG; KOG2229; Eukaryota.
DR InParanoid; Q6NV26; -.
DR OrthoDB; 426305at2759; -.
DR PhylomeDB; Q6NV26; -.
DR PRO; PR:Q6NV26; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Unplaced.
DR GO; GO:0005730; C:nucleolus; ISS:UniProtKB.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR GO; GO:0042273; P:ribosomal large subunit biogenesis; IBA:GO_Central.
DR GO; GO:0000055; P:ribosomal large subunit export from nucleus; IBA:GO_Central.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR027312; Sda1.
DR InterPro; IPR007949; SDA1_dom.
DR InterPro; IPR012977; Uncharacterised_NUC130/133_N.
DR PANTHER; PTHR12730; PTHR12730; 1.
DR Pfam; PF08158; NUC130_3NT; 1.
DR Pfam; PF05285; SDA1; 2.
DR SUPFAM; SSF48371; SSF48371; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Nucleus; Protein transport; Reference proteome;
KW Ribosome biogenesis; Transport.
FT CHAIN 1..682
FT /note="Protein SDA1 homolog"
FT /id="PRO_0000287485"
FT REGION 226..248
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 485..545
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 564..587
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 601..682
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 254..319
FT /evidence="ECO:0000255"
FT COMPBIAS 485..506
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 507..541
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 601..628
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 644..658
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 659..676
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 158
FT /note="N -> K (in Ref. 1; AAM34650)"
FT /evidence="ECO:0000305"
FT CONFLICT 294
FT /note="Q -> K (in Ref. 1; AAM34650)"
FT /evidence="ECO:0000305"
FT CONFLICT 519
FT /note="D -> E (in Ref. 1; AAM34650)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 682 AA; 79022 MW; 4EB8EF43DBC9D842 CRC64;
MSGRHNNKLP TNLPQLQNLI KRDPKSYTEE FLQQYRHYQS NVEIFKHQPD KANKDLSELV
MFLAQVGHCY LEELSDFPQQ LTDLLLNYHT VLESDLRMTF CKALIMLRNK DLVSPTSLLG
LFFELLRCHD KLLRKTLYTH IVTDIKNINA KHKNNKMNTT LQNFMYTMLR DSNPIAAKIS
LDVMVELYRR NIWNDAKTVN VITTACFSKV TKILVAGLKF FLGKDEDEKK DDDSESEDEG
STARDLMMRY STGKKTSKNK KKLEKAMKVL KKHKKKKKVE VFNFSAIHLI HDPQDFSEKL
LKQLESSNER FEVKIMMMEL ISRLVGIHEL FLFNFYPFVQ RFLQPHQREV TKILLCAAQS
SHQLVPPEII EPVIMTIANN FVTDRNSGEV MTVGINAIKE VVARCPLSMS EDLLQDLTQY
KSHKDKNVVM SARGLIQLFR DLNPKMLTRK DRGRPTESSK EAKIHKYGEL EAKDYIPGAE
VLEAEKAEDE EDEDGWESAS MSDDDEDGEW VNVHHSSDDD QAEVAEKLQS IPEEERKAKA
AMVSTSRLLT QDDFKKIRVA QMAKEVGNAP GKGQKRKNVD SDEEERGELL SLRDIERLHK
KPKSDKETRL ATAMAGRTDR KEFTKKRGKL NPYASTSNKE KKRKKNFMMM RHSQNVRTKG
KRSFREKQIA LRDSLLKKRK FK