SDA1_XENTR
ID SDA1_XENTR Reviewed; 689 AA.
AC A4IIB1;
DT 08-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2007, sequence version 1.
DT 03-AUG-2022, entry version 59.
DE RecName: Full=Protein SDA1 homolog;
DE AltName: Full=SDA1 domain-containing protein 1;
GN Name=sdad1;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Required for 60S pre-ribosomal subunits export to the
CC cytoplasm. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the SDA1 family. {ECO:0000305}.
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DR EMBL; BC135943; AAI35944.1; -; mRNA.
DR RefSeq; NP_001095942.1; NM_001102472.1.
DR AlphaFoldDB; A4IIB1; -.
DR SMR; A4IIB1; -.
DR STRING; 8364.ENSXETP00000045076; -.
DR GeneID; 100124509; -.
DR KEGG; xtr:100124509; -.
DR CTD; 55153; -.
DR eggNOG; KOG2229; Eukaryota.
DR InParanoid; A4IIB1; -.
DR OrthoDB; 426305at2759; -.
DR Proteomes; UP000008143; Chromosome 1.
DR Proteomes; UP000790000; Unplaced.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR GO; GO:0042273; P:ribosomal large subunit biogenesis; IEA:InterPro.
DR GO; GO:0000055; P:ribosomal large subunit export from nucleus; IEA:InterPro.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR027312; Sda1.
DR InterPro; IPR007949; SDA1_dom.
DR InterPro; IPR012977; Uncharacterised_NUC130/133_N.
DR PANTHER; PTHR12730; PTHR12730; 1.
DR Pfam; PF08158; NUC130_3NT; 1.
DR Pfam; PF05285; SDA1; 2.
DR SUPFAM; SSF48371; SSF48371; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Nucleus; Protein transport; Reference proteome;
KW Ribosome biogenesis; Transport.
FT CHAIN 1..689
FT /note="Protein SDA1 homolog"
FT /id="PRO_0000328431"
FT REGION 485..512
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 606..689
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 254..319
FT /evidence="ECO:0000255"
FT COMPBIAS 486..509
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 606..652
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 664..681
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 689 AA; 80052 MW; 2F30C811DC250376 CRC64;
MSGRNNNKLP TNLPQLQNLI KRDPTSYREE FLQQYKHYLS VIEIFKLQPD KPNKELSTLV
MFMAQTAHCF PQYLEDFPEQ LKSLLRVHHT VMDPDQRMTL CKALILLRNK NLISPSVLLE
LFFELLRCQD KLLRKTLYTH IVTDIKNINA KHKNNKVNTT LQNFMYTMVR DNNAIAAKIS
LDVMIELYRR NIWNDAKTVN VISTSCFSKV TKILVAALKF FLGKDEEEKK DSDSESEDEG
PTARDLMVRY STGKKNTKNK KKLEKAMKVL KKHKKKKRPE VFNFSAIHLV HDPQEFAEKL
LKQLEASKER FEVKLMHMDL ISRLVGIHEL FLFNFYPFVQ RFLQPHQREV TKILLYAAQA
THHLVPPEIS QSVLRTIANN FVTDRNSGEV MTVGINAIKE LTARCPLAMT EELLQDLALY
KTHKDKNVSM SARSLIQLFR SLNPEMLQKK FRGKPTEASK EARIHAYGEL DAKDYIPGAE
VLEVEQEKTE EPEEDDGWES ASLSDDDEDG EWIDVHHSSD EEQQEVADKI QAMPAEERKA
KAATVSASRL LSQEDFKKIR LAQLAKEMNN APGKSVKRKN IEIDSDEEER SGELLSLRDI
EHLHKKPKSD KETRLATVMA GRTDRKEFVR KKSKMNPHAS STNKEKKKNK NFMMMRYSQN
IRSKNKRSFR DKQIALRDSL LKKRKRLMK