SDEH3_ARATH
ID SDEH3_ARATH Reviewed; 463 AA.
AC Q9SD22;
DT 07-SEP-2016, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 25-MAY-2022, entry version 113.
DE RecName: Full=Senescence/dehydration-associated protein At3g51250 {ECO:0000305};
GN OrderedLocusNames=At3g51250 {ECO:0000312|Araport:AT3G51250};
GN ORFNames=F24M12.290 {ECO:0000312|EMBL:CAB62647.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
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DR EMBL; AL132980; CAB62647.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE78768.1; -; Genomic_DNA.
DR EMBL; AY050372; AAK91390.1; -; mRNA.
DR EMBL; AY120694; AAM52237.1; -; mRNA.
DR PIR; T45756; T45756.
DR RefSeq; NP_190693.1; NM_114984.3.
DR AlphaFoldDB; Q9SD22; -.
DR STRING; 3702.AT3G51250.1; -.
DR iPTMnet; Q9SD22; -.
DR MetOSite; Q9SD22; -.
DR PaxDb; Q9SD22; -.
DR PRIDE; Q9SD22; -.
DR ProteomicsDB; 232719; -.
DR EnsemblPlants; AT3G51250.1; AT3G51250.1; AT3G51250.
DR GeneID; 824288; -.
DR Gramene; AT3G51250.1; AT3G51250.1; AT3G51250.
DR KEGG; ath:AT3G51250; -.
DR Araport; AT3G51250; -.
DR TAIR; locus:2081013; AT3G51250.
DR eggNOG; ENOG502QPY0; Eukaryota.
DR HOGENOM; CLU_034602_0_0_1; -.
DR InParanoid; Q9SD22; -.
DR OMA; PTIDMND; -.
DR OrthoDB; 748439at2759; -.
DR PhylomeDB; Q9SD22; -.
DR PRO; PR:Q9SD22; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9SD22; baseline and differential.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR GO; GO:0009506; C:plasmodesma; HDA:TAIR.
DR InterPro; IPR009686; Senescence/spartin_C.
DR InterPro; IPR045036; Spartin-like.
DR PANTHER; PTHR21068; PTHR21068; 1.
DR Pfam; PF06911; Senescence; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..463
FT /note="Senescence/dehydration-associated protein At3g51250"
FT /id="PRO_0000436972"
FT DOMAIN 269..437
FT /note="Senescence"
FT /evidence="ECO:0000255"
FT REGION 1..31
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 52..74
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 146..172
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 154..172
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 463 AA; 49904 MW; 4623C0EF6F799656 CRC64;
MNPSHGGDDK QRPAMYPQVD QSIPDNPFAS TNPYVASSPY LYPSLSSHNL GPNLFPDHGD
ASNDQSPSAP PQATEEVLIR VPGAILNLID KSYSVELACG DFTIVRIIQG QNIVAVLANV
GNEIQWPLTK NEVAAKVDGS HYFFSIHPPK EKGQGSGSDS DDEQGQKSKS KSDDEILNYG
LTIASKGQEN VLLVLDQVLR DYSCFTEQRM SEKAKETGEE VLGNSVVADT SPEELKGERK
DVVEGQCAAY WTTLAPNVED YTHSTAKMIA SGSGKLIRGI LWCGDVTVER LKKGNEVMKN
RLSRAEKEKD VSPETLRRIK RVKRVTQMTE KVATGVLSGV VKVSGFITGS MANSKAGKKL
FGLLPGEIVL ASLDGFSKIC DAVEVAGKNV MSTSSTVTTE LVNHRYGTKA AEATNEGLDA
AGHAFGTAWV AFKIRKAFNP KNVIKPSSLA KSVSELKAKK GSK
