SDEH4_ARATH
ID SDEH4_ARATH Reviewed; 448 AA.
AC F4JNX2; O65635;
DT 05-OCT-2016, integrated into UniProtKB/Swiss-Prot.
DT 28-JUN-2011, sequence version 1.
DT 25-MAY-2022, entry version 58.
DE RecName: Full=Senescence/dehydration-associated protein At4g35985, chloroplastic {ECO:0000305};
DE Flags: Precursor;
GN Name=P85 {ECO:0000303|PubMed:24260266};
GN OrderedLocusNames=At4g35985 {ECO:0000312|Araport:AT4G35985};
GN ORFNames=T19K4.110 {ECO:0000312|EMBL:CAA18492.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP TISSUE SPECIFICITY, AND INDUCTION BY PERONOSPORA TABACINA; SALT STRESS AND
RP COLD.
RC STRAIN=cv. Columbia;
RX PubMed=24260266; DOI=10.1371/journal.pone.0079622;
RA Banerjee J., Sahoo D.K., Dey N., Houtz R.L., Maiti I.B.;
RT "An intergenic region shared by At4g35985 and At4g35987 in Arabidopsis
RT thaliana is a tissue specific and stress inducible bidirectional promoter
RT analyzed in transgenic arabidopsis and tobacco plants.";
RL PLoS ONE 8:E79622-E79622(2013).
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000255}.
CC -!- TISSUE SPECIFICITY: Expressed in leaves (especially in midribs and
CC trichomes), apical meristemic regions, stems, roots and flowers.
CC {ECO:0000269|PubMed:24260266}.
CC -!- INDUCTION: By salt stress (e.g. NaCl) and cold. Induced by P.tabacina.
CC {ECO:0000269|PubMed:24260266}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAA18492.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=CAA21484.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=CAB81507.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AL022373; CAA18492.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AL031986; CAA21484.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AL161588; CAB81507.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002687; AEE86598.1; -; Genomic_DNA.
DR PIR; T04708; T04708.
DR RefSeq; NP_567995.1; NM_119765.2.
DR AlphaFoldDB; F4JNX2; -.
DR STRING; 3702.AT4G35985.1; -.
DR PaxDb; F4JNX2; -.
DR PRIDE; F4JNX2; -.
DR ProteomicsDB; 234496; -.
DR EnsemblPlants; AT4G35985.1; AT4G35985.1; AT4G35985.
DR GeneID; 829753; -.
DR Gramene; AT4G35985.1; AT4G35985.1; AT4G35985.
DR KEGG; ath:AT4G35985; -.
DR Araport; AT4G35985; -.
DR TAIR; locus:505006562; AT4G35985.
DR eggNOG; ENOG502QPY0; Eukaryota.
DR HOGENOM; CLU_034602_0_0_1; -.
DR InParanoid; F4JNX2; -.
DR OrthoDB; 748439at2759; -.
DR PRO; PR:F4JNX2; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; F4JNX2; baseline and differential.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR GO; GO:0009409; P:response to cold; IEP:UniProtKB.
DR GO; GO:0002239; P:response to oomycetes; IEP:UniProtKB.
DR GO; GO:0009651; P:response to salt stress; IEP:UniProtKB.
DR InterPro; IPR009686; Senescence/spartin_C.
DR InterPro; IPR045036; Spartin-like.
DR PANTHER; PTHR21068; PTHR21068; 1.
DR Pfam; PF06911; Senescence; 1.
PE 2: Evidence at transcript level;
KW Chloroplast; Plastid; Reference proteome; Transit peptide.
FT TRANSIT 1..56
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 57..448
FT /note="Senescence/dehydration-associated protein At4g35985,
FT chloroplastic"
FT /id="PRO_0000436973"
FT DOMAIN 248..416
FT /note="Senescence"
FT /evidence="ECO:0000255"
FT REGION 1..36
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 422..448
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 10..36
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 448 AA; 48679 MW; E5A5B7B75BBF8B73 CRC64;
MECSATPPKL YPTVDTSTTV APLPKSSSSS SSTNNNNLYP SINVNDLVNN IFPDPTASDS
ASAPPLATEE VILTIHGAMV HLIDKSYSVE LACGDLEILR LVQGDITVAV FARVGDEIQW
PLTKDEPAVK VDESHYFFSL RPVKESESSD HSVNETENEM LNYGLTMASK GQEPMLEKLD
KILADYSSFT AEEKQKEENV LDLTAAKETS PEELKGKRKK MVEKQCTAYW TTLAPNVEDY
SGVAAKLIAA GSGQLIKGIL WCGDLTMDRL MWGNDFMKKK LSKAEKERQV SPGTLKRLKR
VKKMTKMTEK VANGVLSGVV KVSGFFSSSV INSKAGQKLF GLLPGEMVLA TLDGFNKVCD
AVEVAGRHVM KTTSDVTTEI VDHKYGAKTA QATNEGLSAA GHAFGTAWTV FKIRQALNPK
SAMKPSSLAK TVVKTAAKER KKGKKSSK
