SDHD_BURTA
ID SDHD_BURTA Reviewed; 444 AA.
AC Q2T8Q2;
DT 26-JUN-2007, integrated into UniProtKB/Swiss-Prot.
DT 24-JAN-2006, sequence version 1.
DT 25-MAY-2022, entry version 81.
DE RecName: Full=Probable D-serine dehydratase {ECO:0000255|HAMAP-Rule:MF_01030};
DE EC=4.3.1.18 {ECO:0000255|HAMAP-Rule:MF_01030};
DE AltName: Full=D-serine deaminase {ECO:0000255|HAMAP-Rule:MF_01030};
DE Short=DSD {ECO:0000255|HAMAP-Rule:MF_01030};
GN Name=dsdA {ECO:0000255|HAMAP-Rule:MF_01030}; OrderedLocusNames=BTH_II0245;
OS Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 /
OS E264).
OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC Burkholderiaceae; Burkholderia; pseudomallei group.
OX NCBI_TaxID=271848;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700388 / DSM 13276 / CIP 106301 / E264;
RX PubMed=16336651; DOI=10.1186/1471-2164-6-174;
RA Kim H.S., Schell M.A., Yu Y., Ulrich R.L., Sarria S.H., Nierman W.C.,
RA DeShazer D.;
RT "Bacterial genome adaptation to niches: divergence of the potential
RT virulence genes in three Burkholderia species of different survival
RT strategies.";
RL BMC Genomics 6:174-174(2005).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=D-serine = NH4(+) + pyruvate; Xref=Rhea:RHEA:13977,
CC ChEBI:CHEBI:15361, ChEBI:CHEBI:28938, ChEBI:CHEBI:35247; EC=4.3.1.18;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01030};
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01030};
CC -!- SIMILARITY: Belongs to the serine/threonine dehydratase family. DsdA
CC subfamily. {ECO:0000255|HAMAP-Rule:MF_01030}.
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DR EMBL; CP000085; ABC35346.1; -; Genomic_DNA.
DR AlphaFoldDB; Q2T8Q2; -.
DR SMR; Q2T8Q2; -.
DR EnsemblBacteria; ABC35346; ABC35346; BTH_II0245.
DR KEGG; bte:BTH_II0245; -.
DR HOGENOM; CLU_035707_0_0_4; -.
DR OMA; ESDPNCF; -.
DR Proteomes; UP000001930; Chromosome II.
DR GO; GO:0008721; F:D-serine ammonia-lyase activity; IEA:UniProtKB-EC.
DR GO; GO:0016836; F:hydro-lyase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
DR GO; GO:0046416; P:D-amino acid metabolic process; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.50.1100; -; 2.
DR HAMAP; MF_01030; D_Ser_dehydrat; 1.
DR InterPro; IPR011780; D_Ser_am_lyase.
DR InterPro; IPR001926; PLP-dep.
DR InterPro; IPR036052; Trypto_synt_PLP_dependent.
DR PANTHER; PTHR48078:SF9; PTHR48078:SF9; 1.
DR Pfam; PF00291; PALP; 1.
DR SUPFAM; SSF53686; SSF53686; 1.
DR TIGRFAMs; TIGR02035; D_Ser_am_lyase; 1.
PE 3: Inferred from homology;
KW Lyase; Pyridoxal phosphate.
FT CHAIN 1..444
FT /note="Probable D-serine dehydratase"
FT /id="PRO_0000291722"
FT MOD_RES 110
FT /note="N6-(pyridoxal phosphate)lysine"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01030"
SQ SEQUENCE 444 AA; 46455 MW; C32C1650AF6CB377 CRC64;
MLMHDVRPLP LDPNLLAILQ AGSPTLWLNP HQGEPLPDFA PTAADLAEAG ARLHRCAGLL
AELFPELRPL GGRIASPLQP AEPLKRADHA QAGAWFVKRD DALPVAGSIK ARGGFHEVLA
LAESIAERHG LVSAGADRRA LASGEAHALF ARHTVMVGST GNLGLSIGML ASALGFRTVV
HMSADAKAWK RARLRTRGVD VVEHAGDYAK AVDAGRRQAA GMPRCHFVDD EGSRMLFLGY
ATAAAELAAQ LAQAGRPVDA RHPLFVHLPC GVGGAPGGIA YGLKARYGEH VHVFVAEPTA
SPCVLVQLAS GGAHPVSVYD VGLDNRTEAD GLAVAQASHL AGPLLRAQAA GVFTVDDRQL
FAHLLDARER LGIDLEPSAA AAFGGPAWLA GSEAGRAYLR GRGIVPEAAT HVIWATGGSL
VPAEEHRRFQ ARACAQRRES GAGA