SDHD_PSEAB
ID SDHD_PSEAB Reviewed; 448 AA.
AC Q02QJ1;
DT 26-JUN-2007, integrated into UniProtKB/Swiss-Prot.
DT 14-NOV-2006, sequence version 1.
DT 03-AUG-2022, entry version 72.
DE RecName: Full=Probable D-serine dehydratase {ECO:0000255|HAMAP-Rule:MF_01030};
DE EC=4.3.1.18 {ECO:0000255|HAMAP-Rule:MF_01030};
DE AltName: Full=D-serine deaminase {ECO:0000255|HAMAP-Rule:MF_01030};
DE Short=DSD {ECO:0000255|HAMAP-Rule:MF_01030};
GN Name=dsdA {ECO:0000255|HAMAP-Rule:MF_01030}; OrderedLocusNames=PA14_20650;
OS Pseudomonas aeruginosa (strain UCBPP-PA14).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=208963;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=UCBPP-PA14;
RX PubMed=17038190; DOI=10.1186/gb-2006-7-10-r90;
RA Lee D.G., Urbach J.M., Wu G., Liberati N.T., Feinbaum R.L., Miyata S.,
RA Diggins L.T., He J., Saucier M., Deziel E., Friedman L., Li L., Grills G.,
RA Montgomery K., Kucherlapati R., Rahme L.G., Ausubel F.M.;
RT "Genomic analysis reveals that Pseudomonas aeruginosa virulence is
RT combinatorial.";
RL Genome Biol. 7:R90.1-R90.14(2006).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=D-serine = NH4(+) + pyruvate; Xref=Rhea:RHEA:13977,
CC ChEBI:CHEBI:15361, ChEBI:CHEBI:28938, ChEBI:CHEBI:35247; EC=4.3.1.18;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01030};
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01030};
CC -!- SIMILARITY: Belongs to the serine/threonine dehydratase family. DsdA
CC subfamily. {ECO:0000255|HAMAP-Rule:MF_01030}.
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DR EMBL; CP000438; ABJ12608.1; -; Genomic_DNA.
DR RefSeq; WP_003138263.1; NZ_CP034244.1.
DR AlphaFoldDB; Q02QJ1; -.
DR SMR; Q02QJ1; -.
DR PRIDE; Q02QJ1; -.
DR EnsemblBacteria; ABJ12608; ABJ12608; PA14_20650.
DR KEGG; pau:PA14_20650; -.
DR HOGENOM; CLU_035707_0_0_6; -.
DR OMA; ESDPNCF; -.
DR BioCyc; PAER208963:G1G74-1704-MON; -.
DR Proteomes; UP000000653; Chromosome.
DR GO; GO:0008721; F:D-serine ammonia-lyase activity; IEA:UniProtKB-EC.
DR GO; GO:0016836; F:hydro-lyase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
DR GO; GO:0046416; P:D-amino acid metabolic process; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.50.1100; -; 2.
DR HAMAP; MF_01030; D_Ser_dehydrat; 1.
DR InterPro; IPR011780; D_Ser_am_lyase.
DR InterPro; IPR001926; PLP-dep.
DR InterPro; IPR000634; Ser/Thr_deHydtase_PyrdxlP-BS.
DR InterPro; IPR036052; Trypto_synt_PLP_dependent.
DR PANTHER; PTHR48078:SF9; PTHR48078:SF9; 1.
DR Pfam; PF00291; PALP; 1.
DR SUPFAM; SSF53686; SSF53686; 1.
DR TIGRFAMs; TIGR02035; D_Ser_am_lyase; 1.
DR PROSITE; PS00165; DEHYDRATASE_SER_THR; 1.
PE 3: Inferred from homology;
KW Lyase; Pyridoxal phosphate.
FT CHAIN 1..448
FT /note="Probable D-serine dehydratase"
FT /id="PRO_0000291737"
FT MOD_RES 119
FT /note="N6-(pyridoxal phosphate)lysine"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01030"
SQ SEQUENCE 448 AA; 48198 MW; 2C0A876135BEE3A9 CRC64;
MILGTPKADW LAEFPRLADL IALRPSEWFN PAIAPSAEAL ADVGLGAADV ADASARLQRF
APLIARLFPE TAASGGIIES DLVEVAAFHD ALRQHYAAEL PGRLWLKRDS HLPISGSIKA
RGGIYEVLAH AERLALEHGL IGLDDDYSRL AEADCRAFFA RHRIAVGSTG NLGLSIGIIG
AALGFQASVH MSADARQWKK DKLRAHGVTV VEYASDYSVA VEQGRREAAG DPYTHFVDDE
NSRDLFLGYA VAAERLRGQL DAAGIRVDSE HPLFVHLPCG VGGGPGGVAF GLKLAFGDAV
HCLFAEPTHS PCMFLGVYTG RHEQVSVQDF GIDNRTAADG LAVGRPSGFV GRAMQRLLDG
YYTVDDDELF RLLALLERSQ GIRLEPSALA GAPGIARVTR EPQGYRERMG LTSARLANAT
HLVWATGGGM VPETEMRAYL KRGRSLLD